KEGG   Streptococcus intermedius C270: SII_0515
Entry
SII_0515          CDS       T02831                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
siu  Streptococcus intermedius C270
Pathway
siu03030  DNA replication
siu03430  Mismatch repair
siu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:siu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SII_0515 (dnaE)
   03430 Mismatch repair
    SII_0515 (dnaE)
   03440 Homologous recombination
    SII_0515 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:siu03032]
    SII_0515 (dnaE)
   03400 DNA repair and recombination proteins [BR:siu03400]
    SII_0515 (dnaE)
Enzymes [BR:siu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SII_0515 (dnaE)
DNA replication proteins [BR:siu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SII_0515 (dnaE)
DNA repair and recombination proteins [BR:siu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SII_0515 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AGU77702
Position
519780..522881
AA seq 1033 aa
MIAQLDTKTVYTFMDSLISIKKYVKTAKNLGYQALGMMDIDNLYGAYHFMEIATEQGIQP
LLGVEMTLEYVDVPLNLRFLALDSQGYRNLMKLSTLKMIGKRKWEEFQHLLEGVAIIVPV
FEGIEALDLGREFYIGVFPDTPKQVFHHTTLPLHTVRYFDTGDLETLQMLCAIRENSSLR
EVRNLPTHEYFLSLEQFTQAFQENFPESLDNLEQLVSNIHYEINTELKLPRFNPERLAVE
ELREKAETGLERKGLGTSIYKERLEQELSVIHQMGFDDYFLIVWDLLRFGRSQGYYMGMG
RGSAVGSLVAYALDITGIDPVEKNLLFERFLNVERYTMPDIDIDIPDVYRPEFIRYVRDR
YGTMHAAQIVTYSTFGAKQAIRDVFKRYGVPEYELTNITRKISFRDSLTSAYEKNISFRQ
IINSKLEYQKAFEIAKKIEGNPRQTSIHAAGVVMSDNDLTDHIPLKYGEDMYITQYDAHG
VESNGLLKMDFLGLRNLTFVQRMKEAVLEKYGVAINIAKIDLEDTITLQLFAAGRTKGIF
QFEQAGAINLLKRVQPVQFEEIVATTSLNRPGASDYIDNFVKRKHGQEKVEMLDPTLEDI
LLPTYGIMLYQEQVMQVAQRFGGFSLGKADVLRRAMGKKNAAEMHKVEAEFIAGARKFGH
SEIKAKEVFAVMEKFAGYGFNRSHAYAYSALAFQLAYFKAHYPDIFFDIMLNYSSSDYIT
DALEFDFQVASLNINNIPYRDKFQDKQIYLGLKNIKGLPRDVAYWIIENRPFSNVEDFVL
KLPTQYHKVQLLTPLVQIGLFDVFEKNRQKILQNLPNLFVFADELGSLFADTNYSWTEAE
AYTEAEKFELEKEIIGVGLSEHPLVKLAKAATQSFTPIQELVENTHATILVEILSIRVIR
TKTGENMAFLQVSDTKIKMEVTVFPDAFKQLGKGLHEKGFYYLTGRIQKRENRLQMILNG
LQEVVTERFWIQVEDHGYDAAISDILQQFRGDIPVVIRYENERKTVAIPQYRVQKSEKLQ
EELKKITMKTIYQ
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgattgctcagttagataccaaaacggtttatacctttatggatagtttaatttcgata
aagaaatatgtaaaaacagccaaaaatttaggatatcaagctctagggatgatggacatt
gacaatctctatggagcttatcattttatggaaattgcgactgagcaaggaattcagccg
cttttaggtgtggaaatgaccttggagtatgttgatgttcctctgaatcttcgtttttta
gctctcgatagtcaaggttatcgcaatttaatgaaactgtccacattgaaaatgatagga
aaaagaaagtgggaagaatttcaacatttattagaaggagtagccattattgtgcctgtg
tttgaaggtatcgaggctttagacttgggacgggaattttatattggcgtatttcctgat
actccaaagcaagtgttccaccatacaactttacctttgcatactgttcgctattttgat
acaggggatttagagactttacaaatgctgtgtgctattcgggaaaatagcagtttgcgg
gaagttagaaatttacccactcacgagtatttcttatcattagagcaattcacacaggcc
tttcaagaaaatttcccagaaagtttagataatttggaacagttagtttcaaacattcat
tatgaaattaatacagagttaaaattaccacgctttaatccagaacgtttagcggtagaa
gagttacgagaaaaggcagaaacagggttagagagaaaaggtttgggaacctccatttac
aaagaacgcttggagcaagagctgtctgtcatccaccaaatgggctttgatgattacttt
ttgattgtgtgggatttactgcgttttggtcgtagccaaggctactatatgggcatggga
cgtggatctgctgttggaagtttagttgcctatgcgctagatattacaggaattgatcct
gtcgaaaaaaatctcctttttgagcgctttttaaatgtagaacgttatacaatgcctgat
attgatattgatattcctgacgtctatcgaccagagtttatccgttatgttcgtgatcgg
tatggaaccatgcatgcggctcaaatcgtgacatattcgacttttggggccaagcaagca
attcgtgatgtttttaagcgttacggtgttccagagtatgaattgactaatatcacccgt
aaaattagttttcgagatagcttaacatcggcttatgaaaaaaatatttcttttcgacag
attattaacagcaaattggaatatcaaaaagcctttgaaattgcgaaaaaaattgaagga
aatccgcgccagacctctattcacgcagcaggtgtggtaatgagtgataatgacttgaca
gatcacatcccacttaaatatggggaagatatgtacatcacacaatacgatgcgcatggt
gttgaaagtaatggtttgctcaaaatggactttcttggcttgcgcaacctgacctttgtt
caacgaatgaaagaagcagttttggagaagtacggtgtcgctattaacattgcaaagatt
gacctggaggatactataaccttgcagctttttgcagcgggtagaaccaagggtattttt
caatttgagcaagcaggcgctattaaccttttgaagcgtgttcagcctgtgcaatttgaa
gaaatcgtcgccactacatcactcaaccgtccgggagctagtgattatatagataatttt
gtaaaaaggaagcatggccaagaaaaggtagaaatgctggatccaactttggaggatatt
ttactaccaacctatggtattatgctttatcaagagcaggtaatgcaagtagcacaacga
tttggaggtttttctcttgggaaagctgatgttttacgtcgtgctatgggtaaaaaaaat
gctgccgaaatgcacaaagtggaagcagagtttatcgcgggtgctcgaaagtttggacat
tctgaaatcaaagcaaaagaagtgtttgcggttatggaaaagtttgcaggttacggattt
aatcgtagccacgcttatgcatactccgcccttgcttttcagttggcatatttcaaagcg
cactatcctgatattttctttgatattatgctgaattattcaagcagtgattacatcaca
gatgcgttagagttcgactttcaagtcgcttctttaaatatcaataacattccttatcga
gataaattccaagacaagcagatatatttaggcttgaaaaacattaaaggattgccacgc
gatgttgcttattggattattgaaaatcgtccgttttcaaatgtagaagacttcgttttg
aaattaccaacacaatatcataaggttcagttactaactcccttagtacaaatcggctta
tttgatgtatttgaaaaaaatcgtcaaaaaatcctgcaaaatcttcccaatttgtttgtc
tttgcagatgaattaggcagtctttttgcagatacaaattatagttggacagaagcggag
gcttatacagaagcagagaaatttgagctagaaaaggaaattatcggtgttggtttgagc
gagcatcctttggtaaagcttgcaaaagctgctactcaatcctttactcctattcaagag
ttagttgaaaacactcatgcgacgattttagtagaaattttgtccattcgtgtcattcgt
accaaaacgggtgaaaatatggcgttcttacaagtaagtgatactaaaataaaaatggaa
gtgacagtgtttccagatgcctttaaacagttaggcaaaggtttgcatgaaaaaggtttc
tattatctgactggtcggattcagaaacgagagaatcgtttacagatgattttaaatggt
ttgcaggaagttgttacagaacgcttttggatacaagtagaagatcacggatatgatgca
gcaatatctgatattttacagcaatttcgaggagatattccagtcgttatccgttatgaa
aatgaaagaaagacagtggcaattcctcaatatcgtgttcaaaaatcagagaaattacaa
gaagaattgaagaaaataaccatgaaaacgatttatcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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