KEGG   Streptococcus intermedius C270: SII_0641
Entry
SII_0641          CDS       T02831                                 
Symbol
ermB
Name
(GenBank) rRNA methyltransferase
  KO
K00561  23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
Organism
siu  Streptococcus intermedius C270
Brite
KEGG Orthology (KO) [BR:siu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:siu03009]
    SII_0641 (ermB)
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:siu01504]
    SII_0641 (ermB)
Enzymes [BR:siu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.184  23S rRNA (adenine2085-N6)-dimethyltransferase
     SII_0641 (ermB)
Ribosome biogenesis [BR:siu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SII_0641 (ermB)
Antimicrobial resistance genes [BR:siu01504]
 Gene variants
  Macrolide resistance genes
   23S rRNA methyltransferases
    SII_0641 (ermB)
SSDB
Motif
Pfam: RrnaAD Methyltransf_25 MTS PCMT NodS Methyltransf_31 Methyltransf_11 Methyltransf_32 DOT1 Met_10 TRM13 CMAS Methyltransf_23 Csm1_B Methyltransf_12
Other DBs
NCBI-ProteinID: AGU77828
Position
644482..645219
AA seq 245 aa
MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELD
SHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRAS
DIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTT
DVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTITYEQVLSIFNSYLL
FNGRK
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaacaaaaatataaaatattctcaaaactttttaacgagtgaaaaagtactcaaccaa
ataataaaacaattgaatttaaaagaaaccgataccgtttacgaaattggaacaggtaaa
gggcatttaacgacgaaactggctaaaataagtaaacaggtaacgtctattgaattagac
agtcatctattcaacttatcgtcagaaaaattaaaactgaatactcgtgtcactttaatt
caccaagatattctacagtttcaattccctaacaaacagaggtataaaattgttgggaat
attccttaccatttaagcacacaaattattaaaaaagtggtttttgaaagccgtgcgtct
gacatctatctgattgttgaagaaggattctacaagcgtaccttggatattcaccgaaca
ctagggttgctcttgcacactcaagtctcgattcagcaattgcttaagctgccagcggaa
tgctttcatcctaaaccaaaagtaaacagtgtcttaataaaacttacccgccataccaca
gatgttccagataaatattggaagctatatacgtactttgtttcaaaatgggtcaatcga
gaatatcgtcaactgtttactaaaaatcagtttcatcaagcaatgaaacacgccaaagta
aacaatttaagtaccattacttatgagcaagtattgtctatttttaatagttatctatta
tttaacgggaggaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system