KEGG   Sinorhizobium sp. RAC02: BSY16_1628
Entry
BSY16_1628        CDS       T04514                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
six  Sinorhizobium sp. RAC02
Pathway
six00740  Riboflavin metabolism
six01100  Metabolic pathways
six01110  Biosynthesis of secondary metabolites
six01240  Biosynthesis of cofactors
six02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:six00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    BSY16_1628 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BSY16_1628 (ribD)
Enzymes [BR:six01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     BSY16_1628 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     BSY16_1628 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD XOO_2897-deam
Other DBs
NCBI-ProteinID: AOF90334
Position
complement(1692487..1693584)
AA seq 365 aa
MSGLAEDERFMAAAIRLCRRNLGLTSTNPSVACLIVKDGVVLGSAVTAPGGRPHAETQAL
AEAGEAARDATAYVTLEPCSHHGKTPPCADALIASGVARVVVSVTDPDERVAGRGLSMLR
DAGIAVETGVLEAEGRAALAAYLNRQTKKQPYVTLKLAVSADGMLGRLGAGQVAITGPVS
RGQVHVLRAETDAILIGIGTALADDPELTCRLPGLEARSPVRIVLDPRLELPPASKLAGT
ARAVPVIVVTAKESMDDPALALRREALEALGVEVLICDPRRLDALLTALATRGISSLLVE
GGARAARSFLDAGLVDRVLLFNGTGTIGKDGVASPFVSGRMPDGFSLCHTARYGADVLQD
YERDE
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgtccggcctggccgaagacgaacgcttcatggcagcggcgatccgcctctgccgccgc
aatctcgggcttacgtccaccaatccctccgtcgcctgcttgatcgtcaaggacggcgtg
gttctcggctcggccgtcacggcaccgggtggtcggccgcatgcggaaacacaggcgctc
gccgaagcgggcgaagcggctagggatgctaccgcctatgtcacactcgaaccctgctcg
catcacggcaagacaccgccctgcgccgatgcgctgattgcctccggcgtggcgcgcgtc
gtcgtctcggtgacggacccggatgagcgggtggcgggcagggggctttcgatgctgcgg
gatgccggcatcgcggtcgagacgggcgtgctggaggcggaaggccgcgcggcactcgcg
gcgtacttgaatcgccagacgaagaagcagccttatgtaactctgaaacttgccgtttct
gccgatggcatgctcggccggctgggggcagggcaggtggccatcaccggtcccgtttcg
cgcggacaggtgcatgtgctgcgcgccgagacagatgccatcctgatcggcatcggcacg
gcacttgccgacgatcccgaactgacctgccgcctgccggggctggaagcgcgctcgccg
gttcgcatcgtgctcgatccgcgcctggaactgccgccggcatcaaaactcgccgggacg
gcgcgtgcggtgccggtcatcgtggtgacggcgaaggagagcatggatgacccggctctc
gctcttcgccgcgaggcactggaggcgctcggcgtcgaggtgctgatctgcgacccgcgc
cggctcgatgcgctgttgaccgcactcgccacgcgcggcatttcctcgttgctggtcgaa
ggtggcgcacgggcggcgcggtctttcctcgacgcgggcctggtcgatcgcgtcctgctg
ttcaacggcaccggcaccattggcaaagacggcgtcgcatccccatttgtgtccgggcgg
atgccggacggcttttcgctctgccacacggcccgctatggtgcggatgttttgcaagat
tacgaaagagacgagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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