KEGG T04959: SJ2017

Shewanella japonica: SJ2017_0429

Entry

SJ2017_0429       CDS       T04959

Name

(GenBank) Arginine--tRNA ligase

K01887

arginyl-tRNA synthetase [EC:6.1.1.19]

Organism

sja Shewanella japonica

Pathway

sja00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:sja00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SJ2017_0429
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sja01007]
    SJ2017_0429
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sja03016]
    SJ2017_0429
   03029 Mitochondrial biogenesis [BR:sja03029]
    SJ2017_0429
Enzymes [BR:sja01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.19  arginine---tRNA ligase
     SJ2017_0429
Amino acid related enzymes [BR:sja01007]
Aminoacyl-tRNA synthetase
  Class I (G)
   SJ2017_0429
Transfer RNA biogenesis [BR:sja03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SJ2017_0429
Prokaryotic type
   Other AARSs
    SJ2017_0429
Mitochondrial biogenesis [BR:sja03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SJ2017_0429

SSDB

Motif

Pfam:

tRNA-synt_1d DALR_1 Arg_tRNA_synt_N tRNA-synt_1g tRNA-synt_1 tRNA-synt_1e

Other DBs

NCBI-ProteinID:

ARD20771

Position

complement(494251..495996)

AA seq 581 aa
MKSHIASLLEQTIDSFKQQGIIPADFQARIQVERTKDKSHGDLATNLAMMLTKVAKKNPR
EIAQLIIDNLPASSHVAKVDIAGPGFINFFIDENALANQLQHALTDEHLGVSLPEKQRVV
VDYSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHDVIRQNHVGDWGTQFGMLLAYMEEL
RAANGEQAALELSDLETFYRAAKVRFDESTDFATRARNLVVSLQSGDEYCNKLWREFNDI
SLNHCHEVYERLGVSLTRKDVHGESAYNDDLEQVVTDLDSKGLLSESNGAKVVFQEEFRT
KDGEPLPVIIQKADGGYLYATSDLAAMRYRSNVLKADRALYFVDLRQALHFQQVFSLAKT
AGFVRKELSLEHTGFGTMNGTDGRPFKTRSGGVVKLVDLLDEANTRAIELVRSKNPDMDE
ATIIEIARVVGISSVKYADLSKNRSSDYIFSFEQMLSFEGNTAPYLLYAYTRVASIFKRA
EDIDLSQAKIVLEHDKEKELGTKLAQFGEVLARMTDKALPHVMCAYVYELASEFSSFYEA
CPVLAAETEEQKQSRLLLSQLTAKTLKTGLSLLGIETLERM

NT seq 1746 nt +upstreamnt +downstreamnt
atgaaatcacatattgcatctttactagaacaaaccatcgactcttttaagcaacaaggc
attatcccagctgattttcaggcacgcattcaagtggagcgaaccaaagataaaagtcac
ggtgatctcgccactaacttggccatgatgctaaccaaagtcgctaagaaaaatcctcgt
gaaattgctcagttgattattgataatcttccagcgtctagccatgtggctaaggtcgat
attgcaggcccaggattcattaacttttttatcgatgaaaatgccttagcaaaccaacta
caacatgccctaacagatgaacacttaggcgtttcgttaccagaaaaacaaagagtcgtc
gtggactattcatcgcctaaccttgctaaagaaatgcatgtaggtcaccttcgttcaacg
attattggcgacagtgtcgttcgtgcacttgaatttttaggccatgatgttatccgtcaa
aaccatgtgggtgactggggcacacaatttggcatgctactagcctacatggaagagtta
cgagcagcgaatggcgagcaagcagcacttgaactttcagatttggaaaccttctaccgt
gccgctaaagtccgcttcgatgaatcaacagattttgcaacacgtgcacgtaatttagtg
gtttcactgcaatcgggcgatgagtactgcaataaattatggcgtgaatttaatgacatc
tcgttaaatcattgtcatgaagtttacgaacgtttaggcgtgagcttaacccgtaaagat
gttcacggtgaaagtgcttataatgacgacctagagcaagtcgtaacagatcttgatagt
aaaggcctattaagcgaaagcaacggcgcaaaagtggtatttcaagaagaattccgcacc
aaagatggtgagccattacccgttattatccaaaaagccgatggtggatacttatacgcc
acctctgatttagcagccatgcgttatcgctcaaacgttttaaaagctgatcgtgcttta
tacttcgttgatttacgccaagcactgcatttccagcaagtatttagcctagcgaaaaca
gctggttttgtccgtaaagagctatctcttgagcacacaggtttcggaacaatgaatggc
accgatggccgtccatttaaaactcgtagtggcggtgtggttaaattagtcgacttatta
gatgaagcaaacacccgtgcaatcgaattagttcgcagtaaaaatcctgatatggacgaa
gcgacaatcattgaaattgcgcgtgttgttggtattagctcagttaaatacgctgactta
tctaaaaaccgtagcagtgattacattttcagctttgaacaaatgctgagctttgaaggc
aacaccgcaccataccttctttatgcatacacacgtgtggctagtatcttcaagcgtgct
gaagatatcgatttaagccaagcgaaaattgtacttgaacatgataaagaaaaagaacta
ggtactaaacttgctcagtttggtgaagtactggctcgtatgacagataaagcattacca
catgtgatgtgtgcttatgtttatgagttagcaagtgagttctcaagcttttacgaggct
tgtccagttcttgcagcagaaactgaagagcaaaaacaaagtcgcttattgttgtcacag
ttaaccgctaagaccttaaaaacagggttatctctgttaggtatcgaaacgttagagcgt
atgtaa

All links

Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

Download RDF

DBGET integrated database retrieval system