KEGG   Shewanella japonica: SJ2017_1140
Entry
SJ2017_1140       CDS       T04959                                 
Name
(GenBank) Valine--tRNA ligase
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
sja  Shewanella japonica
Pathway
sja00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sja00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SJ2017_1140
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sja01007]
    SJ2017_1140
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sja03016]
    SJ2017_1140
Enzymes [BR:sja01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     SJ2017_1140
Amino acid related enzymes [BR:sja01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   SJ2017_1140
Transfer RNA biogenesis [BR:sja03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SJ2017_1140
 Prokaryotic type
    SJ2017_1140
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 Val_tRNA-synt_C tRNA-synt_1g tRNA-synt_1_2 tRNA-synt_1f
Other DBs
NCBI-ProteinID: ARD21467
Position
complement(1359691..1362606)
AA seq 971 aa
MEKTYNPQSIEQSLYQNWEEQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLTRYQRMKGKNTLWQVGTDHAGIATQMLVERKVFAEEGLGRHDLGRDNFIERIWDWKNE
SGGTITKQLRRLGASVDWDRERFTMDEGMSEAVQEVFVRLYDDELIYRGKRLVNWDPKLH
TAISDLEVENKEKQGSMWHFRYPLAEGALTADGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQSLIGKFILLPIVNRLIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHALPMFNI
LTINAEIRSAAEVVNTDGTANNELDNSLPERYAGLERFAARKAIVEEFETLGLLGKIDPH
GLKVPYGDRSGVVIEPLLTDQWYVSVAPMAKTAMEAVDNGDIKFVPQQYENMYNSWMRDI
QDWCISRQLWWGHRIPAWYDEAGKVYVGRDEAEVRAKHNLDESIVLRQDNDVLDTWFSSA
LWTFSTLGWPKNTEELKAFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKT
VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLESLVTKRTGNMMQPKLAAKIEKSTRK
EFADGIEAHGTDALRFTLASMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEVQA
EGADEDAVGEALDCGQLLVDGKPGEMELSLADRWIIGLFNQTVKAYDEHMANYRFDLAAN
TIYEFTWNQFCDWYLELTKPVMQSGSEAQLRGTRHTLVTVLEQMQRLMHPMMPYLTETIW
QRIKPLAGVDGETLMLAEFPEFDATKVDSQAMEDLEWVKQVITAVRNIRAELNIAPSKPL
NALLRGVSEQDKARLEANQTFFKTLAKLESMTILADGETAPMSTTQLVGDMELLIPMAGL
IDVAKEVARIDKLLEKAAGEFKRIEGKLSNQGFVAKAPAAVIEKERAKQAEYQRDIEKLT
EQKAELAKLES
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggaaaaaacatataatccacagtcaattgagcaatctctttaccaaaactgggaagag
caaggctacttcaaaccacatggcgatgagtcaaaaggtaactattgcatcatgatcccg
ccaccgaatgtgacgggtagtttgcacatgggccatgcattccaagataccatcatggat
accttgactcgttaccaacgcatgaagggtaaaaataccctttggcaagtgggtactgac
catgcgggtattgcaactcaaatgctggttgaacgtaaagtctttgcagaagaaggatta
ggccgccacgacttaggccgcgataactttattgaacgcatttgggattggaaaaatgaa
tctggcggtactattactaaacagctacgtcgtttaggcgcatcagttgattgggaccgt
gaacgttttaccatggatgaaggcatgtctgaagccgtacaagaagtgtttgtacgtcta
tacgatgatgagttgatttaccgtggtaaacgcttagtaaactgggatccaaaactgcac
actgcaatttctgatcttgaagttgaaaacaaagaaaagcaaggcagcatgtggcatttc
cgctatccgcttgctgagggtgcattaactgctgatggtaaagactatttagaagtcgcc
actacacgtcctgaaaccatgttaggtgatagtgctgttgcagttcaccctgacgatgaa
cgttatcaatcactgattggtaagttcattttattgccaatcgtaaaccgtcttattcct
atcgtagctgacgattatgtcgacatggaatttggtacaggttgtgtaaaaatcacacct
gcacatgactttaacgattatgaagtcggtaagcgtcacgccctacctatgttcaacatc
ttaacgattaatgcagaaatccgcagtgctgcagaagtcgtcaatacagatggtacagca
aataatgaacttgataacagcttgcctgagcgctatgccggtcttgaacgttttgccgcc
cgtaaagccattgttgaagagttcgaaacattaggtttacttggaaaaatcgaccctcac
ggattgaaagtgccttatggcgatcgttcaggtgttgtcattgaacctttactgacagat
cagtggtatgtctctgttgcaccaatggctaaaactgcgatggaagctgttgataatggc
gacatcaagttcgtaccacaacaatacgagaacatgtacaactcttggatgcgcgatatt
caagactggtgtatctctcgccaactttggtggggacatcgtatcccagcttggtacgac
gaagcaggtaaagtctatgtgggtcgtgacgaagctgaagttcgtgcaaagcataactta
gatgagtctattgtcttacgccaagataatgatgtattagacacatggtttagctctgcg
ttatggacattctcaacattaggttggccaaaaaacaccgaagaattaaaagctttccac
ccaacagatgtgttggttacaggctttgatattattttcttctgggttgcccgtatgatc
atgatgaccatgcatttcattaaagatgaaaatggcaaaccacaagtcccgttcaagact
gtttatgtgacaggtcttatccgtgatgaagcgggtaacaaaatgtcgaagtctaaaggt
aacgtacttgacccattagacatgattgacggtattgaccttgagtcacttgtgactaag
cgtactggcaacatgatgcagcctaaacttgcagctaaaattgaaaaaagcacacgtaaa
gagtttgctgacggtatcgaagcacatggtactgatgcgctacgtttcactttagcgtca
atggcttcaacaggacgtgacatcaactgggacatgaaacgcctagacggttaccgcagt
ttctgtaacaaaatctggaatgcttcacgctacgtactaatgaacaccgaagtacaagct
gaaggcgctgatgaagatgcggttggcgaagccctagattgtggtcaattacttgttgac
ggcaagcctggtgaaatggaactgtcacttgctgatcgctggattatcggtttgttcaat
caaacggtaaaagcttatgacgagcatatggcaaactaccgctttgacttagccgctaac
actatttatgagttcacttggaatcagttctgtgactggtacttagagctaacgaagcct
gtaatgcaaagcggcagcgaagcacagcttcgtggcacacgtcatactctagtcactgta
ctagaacaaatgcagcgtttaatgcacccaatgatgccttatctcaccgaaactatctgg
cagcgcattaaaccgctagcaggagttgacggagagacgttaatgttggctgaattccct
gaatttgatgccactaaagtagactctcaagcgatggaagatcttgagtgggttaagcaa
gtgattacggctgtacgtaatattcgtgcagaacttaacattgctccttctaagccactt
aacgccctactacgcggcgtgagtgaacaagacaaagcacgtctagaagcaaaccaaacc
ttcttcaagaccctagctaagcttgaatctatgaccattcttgccgacggtgaaacagcg
ccaatgtctacaacacagcttgtaggcgatatggagttgttaattccaatggctggatta
attgatgttgctaaagaagtggctcgtatcgacaagctacttgaaaaagcagctggcgag
ttcaaacgtattgaaggcaagttatcgaatcaagggtttgtcgctaaagcacctgcagcc
gtgattgaaaaagagcgtgctaaacaagcggaataccaacgagatattgaaaagctaacc
gaacaaaaagctgaactggctaaactagaaagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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