KEGG   Shewanella japonica: SJ2017_1205
Entry
SJ2017_1205       CDS       T04959                                 
Name
(GenBank) Tyrosine--tRNA ligase
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
sja  Shewanella japonica
Pathway
sja00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sja00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SJ2017_1205
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sja01007]
    SJ2017_1205
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sja03016]
    SJ2017_1205
   03029 Mitochondrial biogenesis [BR:sja03029]
    SJ2017_1205
Enzymes [BR:sja01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     SJ2017_1205
Amino acid related enzymes [BR:sja01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   SJ2017_1205
Transfer RNA biogenesis [BR:sja03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SJ2017_1205
 Prokaryotic type
    SJ2017_1205
Mitochondrial biogenesis [BR:sja03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SJ2017_1205
SSDB
Motif
Pfam: tRNA-synt_1b S4 TyrRSs_C S4_2
Other DBs
NCBI-ProteinID: ARD21532
Position
1428840..1430036
AA seq 398 aa
MADLDQVLAELKRGTDEILVESELLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRA
FQELGHEVIFLIGDFTGMVGDPSGKNNTRPPLTREDVLANAETYKEQVFKILDPAKTRIE
FNSSWLEPLGAAGMIRLGSKQTVARMMERDDFKKRYAAGQSIAIHEFMYPLLQGYDSVAL
KADVELGGTDQKFNLLMGRELQKAEGQKPQSVIMMPLLVGLDGVKKMSKSAHNYIGVSEP
ANEMFGKIMSISDDLMWSYFELLSFRPLQEIAQFKEDVTNGQNPRDVKIALAKEIIARFH
DQAQADAAHQEFINRFQKGAMPEDIDELDLEAGEGLAIANLLKNAGLVGSTSDGMRMVKQ
GAVKMDGEKLTDTRQVFEAGVSAVFQVGKRKFAKVTLV
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggctgatttagaccaagtgttagcagaacttaaacgtggtaccgacgaaatattagtc
gagtctgagctgctagaaaaacttaaagaagggcgtcctttaagaattaagctaggtgca
gatcctaccgctccagatattcacctaggccacactgttattttgaataagttacgtgct
tttcaagagctaggtcatgaggttattttcttgattggtgacttcaccggaatggtaggt
gacccaagtggtaagaataatactcgtcctccgttaactcgtgaagatgtactagcaaat
gctgagacttacaaagagcaagttttcaaaatccttgacccagccaaaactcgcattgag
tttaactcaagttggttagagccattaggtgctgctggtatgatccgtctaggttctaag
caaaccgttgcacgtatgatggaacgtgatgattttaaaaagcgttatgcagccggccag
tcaattgctattcacgagtttatgtatcctttactacaaggttacgactctgtcgcatta
aaggcagatgtagaattgggtggtaccgatcaaaaattcaatttattaatgggccgtgag
ctacaaaaagcggaagggcaaaagccgcaatcagtcattatgatgccgctattagttgga
cttgatggcgttaagaaaatgtctaagtctgctcataactatattggtgtgagtgagcct
gcgaatgaaatgtttggcaaaatcatgtctatctcagatgatttaatgtggagctatttc
gagctgctttcattccgtccattacaagaaattgcccagtttaaagaagatgttaccaat
ggtcagaacccgcgtgatgtgaagattgctttagcaaaagaaatcattgcaaggtttcat
gaccaagcacaagctgatgcagcacatcaagagttcatcaaccgtttccaaaaaggcgcg
atgccggaagatattgatgagctagaccttgaagctggtgaaggcctagcgattgctaac
ttacttaaaaatgcaggtttagtaggttctacgtctgatggcatgcgcatggttaagcaa
ggcgctgtgaaaatggatggtgaaaagctgactgatactcgtcaagtctttgaggcgggc
gtgagcgctgtgttccaagttggtaagcgtaaatttgctaaagtgactctggtttaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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