KEGG   Shewanella japonica: SJ2017_1281
Entry
SJ2017_1281       CDS       T04959                                 
Name
(GenBank) hypothetical protein
  KO
K02674  type IV pilus assembly protein PilY1
Organism
sja  Shewanella japonica
Brite
KEGG Orthology (KO) [BR:sja00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sja02044]
    SJ2017_1281
   02035 Bacterial motility proteins [BR:sja02035]
    SJ2017_1281
Secretion system [BR:sja02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   SJ2017_1281
Bacterial motility proteins [BR:sja02035]
 Pilus system
  Pilus assembly proteins
   SJ2017_1281
SSDB
Motif
Pfam: Neisseria_PilC Catalase_C DUF3678
Other DBs
NCBI-ProteinID: ARD21606
Position
1510348..1513854
AA seq 1168 aa
MFKKISTFTLSFMTIALAATSIADDTELYVAESSARSNDNPQVLLILDTSGSMGDNSFTA
PRFHDQGSIGGSTKLYFSNDGAVVPELSSNQYILNSINGCASSKTFLEEYGIYTGYFRQY
EGNVWSKFPLTDGSAVSTVDCYEDIYEQNTTNASGVSAGYPVDALASPYDSDIEKAKLTD
FGLGDPIHFYTQEYVTWYHNDSKPNGKANGSSYTRMDVAKRILEELIVSTPGIDFGLLIF
NKNDSTSKDGGRIISGIKEASVANKNSVITSIQDSDSIHGNYTPLCETLFEAYSYLYGKP
VKFGHKTSGSTSNPSYDTAIESNGNYISPFVNKDCQSNASIIYVTDGIPNLDVSADSAIA
LLPGVDLTLGEDINEWGTMKTNYLASLSNWMYNNDVNPNAPSDQVVSTYTIGFSSGADAA
EALLEKTAEKAGGEYYKANSAEALKASLLQAVTAIQGTDSSFTSPSVVLDKTQTGDDAYF
AMFLPDKGPRWSGNLKKFKVTADGTVVDKNGNDAFDSSGTIAAEACPYWTTDCTGDSYRG
YHVSDGGVAGVMKSTYSSSVSSRKVLINAGSSGDLVAFTPANAKLNSYLSTDADLADYMG
VDISGIDDNFDWAKGVNVDDEDHDDKADTAPLYLRQDIIGDPLHSRPLVINYGNSSEPDN
RILMGTNHGFLHMFKDDETADVPVSESWAFMPAELLKNIKGLRDNPQTGVHSIYGMDSSP
VAYIERDSSDKVSKAWLFIGMRRGGTSYYALDITNPDSPSLKWISQVSDFTLQGESWSEP
VITKVPGWPSGATTAADADPVLIIGAGYNPTTKDGSNVGSSDSIGTGVYIIDADNGTKVY
TFGLTGSDTVMPGLSDSIPNKVAILDSNNDQLTDRVYATDTGANVWRLDMPGLPNDTSNP
WSAFKFATLGGGTTTTDIRFYSEPVVAQTTFSNIAEHTHTDGSGTSTTTMTYQSIPYDAV
VIGSGHRPHPLDKARADKFFTLQDRNIVTKSYSSAASNTAPDLLELTDLYNVTTESPSSD
SELVTFGAKRGWYYNFSDAGEKSLSAATIVSGRVFFTSYVPETGASETACLVPGQGRLYG
FDLHKGARTYSHSEDYFVMGEQVPDTPTLVVPKNGDSDSYMYLIGIGDAANDMIKNDVLG
DDGCPEGDDKCIGGGLGVNRIYYHQNEN
NT seq 3507 nt   +upstreamnt  +downstreamnt
atgtttaagaagatatccacttttactttaagttttatgactattgctctagctgcgaca
agtatcgctgatgatactgagctatacgtagcagagtcttcagcaagaagtaacgataat
ccgcaagtattacttatattagatacatccggctcaatgggtgataattcttttactgct
cctagattccatgatcaagggagtattggaggcagtactaagttatatttttcgaatgat
ggtgccgttgttccagaactaagtagtaatcaatacatcttaaactcaattaatggctgt
gcgagttctaaaacgttccttgaagaatatggaatatatacgggttattttcgtcagtat
gaaggcaatgtttggagtaaatttccattaacagatggtagtgctgtatcgacagtagat
tgttatgaagatatatatgagcaaaatacaaccaatgctagtggtgtttctgctgggtat
cccgtcgacgcgcttgcctctccttatgattcagatattgaaaaagctaaactgactgat
tttggcttaggtgatccaatacatttttatactcaagaatacgtaacttggtaccataat
gatagcaagccaaatggcaaggcaaatggcagctcatatacacgtatggatgtggcaaaa
cgaatcttagaagagcttatagtcagtactccaggtatagactttggtttattaatattt
aacaaaaacgacagtacttctaaagatggcggtcgtattatttctggtattaaagaggca
tcggttgcaaacaaaaatagcgtaattacgtctattcaagattctgattctattcacggc
aactatacgcctttatgtgaaaccttatttgaagcttatagttacttatatggtaaacca
gtcaaatttggccataaaacatcaggctctacctctaatccttcctatgatacagctatc
gagtctaacgggaattatatttcgccatttgtgaataaagattgccagtctaatgcatca
attatttacgttaccgacggaattccaaatttagatgttagtgccgattctgctatcgcg
ttattaccaggtgtagatttgacattaggtgaagatattaacgagtggggtactatgaaa
accaattatttagcttcactatctaattggatgtacaacaacgatgtcaacccaaatgca
ccgtctgatcaagttgtatcgacttatacgattggctttagttctggtgctgatgccgct
gaagctttattagaaaaaacggccgaaaaagctggtggtgaatattataaagcaaactct
gctgaagcattgaaagcttcgcttttacaagctgtaacagcaattcaaggaacggattct
agttttacttctccttcagtagtgcttgataaaacccaaactggcgatgacgcatatttt
gcaatgtttttgcctgataaaggacctcgttggtcaggtaatttaaagaagtttaaagtg
actgctgatgggacggtagttgataaaaatggcaatgatgcatttgatagttcaggtact
atcgctgcagaagcttgtccgtattggacaactgattgtactggcgattcataccgtggc
tatcatgtttctgatggcggtgttgcaggggtcatgaagtcaacttatagctcgtctgtt
agctcaagaaaggtattgattaacgcaggtagcagcggtgacttagttgccttcacgccg
gcaaatgccaaattgaatagctatttatctacagatgctgatttagctgattacatggga
gtcgacattagcggaatcgatgacaattttgattgggcgaaaggcgtcaatgttgatgat
gaagatcatgatgataaagctgacacagcacctctctatttacgtcaagatatcatcggc
gacccgctgcactcaaggccgcttgttattaactatggcaactcttcagagccggataac
cgtattttaatgggaacaaaccatgggttccttcatatgttcaaggatgatgaaactgct
gatgtacccgtttctgaatcttgggcatttatgccagccgaattgcttaaaaatataaaa
ggtttacgtgataaccctcagacaggtgttcactctatatacggcatggatagttcgcca
gttgcttatattgagagggattcaagtgataaagtctcaaaagcatggttatttattggt
atgagacgaggtggaacttcatattatgctttagatattacaaatccagattcaccttca
ttgaagtggatttctcaagttagcgactttactttacaaggtgaatcgtggtcagagcct
gtaatcactaaggttcctggttggccttctggcgcaacaactgcagctgatgctgatcct
gtattgattatcggcgcaggttataaccctacgacaaaagatggctcaaatgttggaagt
tcagatagtattggcactggggtctatattatcgatgccgataatggaacaaaagtatac
actttcggactaactggcagtgatacggtaatgccagggctttcggacagtattccaaat
aaggtcgcaattcttgatagtaataatgatcagttaaccgatagagtttatgcgacagat
actggtgccaatgtatggcgtctagatatgccaggtttgccaaatgatacttcaaaccct
tggagtgctttcaaatttgcaactctcggtggtgggacaacaacaactgatattcgtttc
tactcagagcctgttgtggcacaaacgactttcagtaacattgcagaacatacgcatacg
gacggtagtggaacctcaacaactacaatgacttatcaaagtattccttatgatgctgtt
gtaataggaagcggacatagaccccaccctcttgataaggcaagagctgataagttcttt
acattgcaagatagaaatattgtcactaaatcttatagctctgcagccagtaatacagca
cctgaccttcttgaactaacagatctctataatgtgacaactgaatcaccttcttcagat
tctgagcttgtaacatttggtgccaagagaggctggtattataactttagtgatgcaggt
gagaaatcattatcagcggcaacaattgtatcaggaagagtcttttttacttcatatgtg
cctgaaactggagccagcgaaaccgcatgtttagtccctggtcaagggcgcttatatggg
ttcgatttacataaaggtgcgaggacgtatagccatagtgaagactattttgtaatgggt
gaacaagtacctgatacgccaacattagtagtaccaaaaaatggcgattcagacagctat
atgtatttgataggtattggtgatgctgctaatgatatgattaaaaacgatgttttaggc
gacgatggttgtcctgaaggcgatgataaatgtatcggtggtggcttaggtgtcaatcga
atttactaccatcagaacgagaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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