KEGG   Shewanella japonica: SJ2017_1766
Entry
SJ2017_1766       CDS       T04959                                 
Name
(GenBank) tRNA-specific 2-thiouridylase MnmA
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
sja  Shewanella japonica
Pathway
sja04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:sja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    SJ2017_1766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sja03016]
    SJ2017_1766
Enzymes [BR:sja01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     SJ2017_1766
Transfer RNA biogenesis [BR:sja03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    SJ2017_1766
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase ThiI QueC Asn_synthase ATP_bind_3
Other DBs
NCBI-ProteinID: ARD22077
Position
complement(2113068..2114186)
AA seq 372 aa
MTSINPDSNGKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDTDEYCLAAEDL
KDAQAVCDKLGIKLHTVNFASEYWDNVFEHFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA
DEILDADFIAMGHYVRRRDNEDGTTQMLRGIDNNKDQSYFLYTLSDKQVAKSLFPVGELE
KFQVRDIAKEMGLITHDKKDSTGICFIGERKFTDFLGTYLPAQPGDIETAEGEVIGTHQG
LMYHTLGQRKGLGIGGMKNSNDDPWYVVEKDLLRNVLIVGQGGNHPRLMSNGMTVSQLHW
VDRKGPSSPAKITVKTRYRQQDVNCTVTTEGDDKISVIFDEPVAAVTPGQSAVFYDGEVC
LGGGIIDTLIRG
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgacatcaatcaatcccgattcaaatggtaaaaaagtcatcgtaggcatgtccggcggt
gtagattcttcagtttctgcatacttgctccaacagcaaggatatcaggttgagggattg
tttatgaagaactgggaagaagatgacacggatgaatattgtcttgcagctgaagattta
aaagatgcgcaggcagtatgtgacaagctaggcattaagcttcacacagttaacttcgcc
tctgaatactgggacaatgtatttgagcacttccttgctgaatataaagcaggtcgtact
cctaacccagatattatgtgcaacaaagaaatcaaatttaaagcatttttagaatttgca
gatgaaattttagatgctgactttattgcgatgggacattacgttcgccgccgtgataac
gaggacggtaccactcaaatgctacgtggtattgataacaacaaagatcaaagctacttc
ttgtataccttaagtgacaaacaagtcgctaaaagtttatttcccgtcggcgaactagaa
aaatttcaagttcgtgatatcgccaaagaaatgggcttaattacccatgataaaaaagac
agtacaggtatctgttttatcggtgaaagaaagttcactgactttttaggtacatattta
ccagcgcaacctggtgatattgaaaccgctgaaggcgaagtcatcggaacccaccaaggt
ttgatgtatcacacgctaggtcaacgtaaagggcttggcattggtggcatgaaaaacagt
aatgacgatccttggtacgtagttgaaaaagacttattgcgtaatgttttaattgtcggc
caaggtggaaaccaccctcgcctgatgtcaaatggcatgacagtaagtcaacttcattgg
gttgaccgcaaaggcccaagttcaccagctaagataaccgtgaaaacacgttaccgtcag
caagatgttaactgcaccgtgacgactgaaggtgatgacaaaattagcgtgatatttgat
gagccagtagctgctgtgactcctggtcagtctgctgttttttatgatggtgaagtctgc
ttaggcggcggtattatcgatacactaattagaggatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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