KEGG   Shewanella japonica: SJ2017_2270
Entry
SJ2017_2270       CDS       T04959                                 
Name
(GenBank) long-chain-fatty-acid--CoA ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
sja  Shewanella japonica
Pathway
sja00061  Fatty acid biosynthesis
sja00071  Fatty acid degradation
sja01100  Metabolic pathways
sja01212  Fatty acid metabolism
sja02024  Quorum sensing
Module
sja_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sja00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SJ2017_2270
   00071 Fatty acid degradation
    SJ2017_2270
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SJ2017_2270
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sja01004]
    SJ2017_2270
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sja04147]
    SJ2017_2270
Enzymes [BR:sja01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SJ2017_2270
Lipid biosynthesis proteins [BR:sja01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   SJ2017_2270
Exosome [BR:sja04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SJ2017_2270
  Exosomal proteins of breast cancer cells
   SJ2017_2270
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ARD22560
Position
complement(2717719..2719392)
AA seq 557 aa
MDQPWINNLPEHVPAEIDSAQFSTLVDMFESAVAKYADQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLVDS
GAKAIVVVSNFARTLEEVVSETPVESVIITGLGDQLSAPKRTLVNFVVKYIKKMVPKYNL
PHALSFRQSLSKGRRLQYVKPEISPEDLSFLQYTGGTTGVSKGAMLSHKNVVSNVLQANG
AYSPALKDGTEFVVTALPLYHIFALTVNCLLFLHKGSKNLLITNPRDLPAFVGELKKYPF
TALTGVNTLFNALVNDEDFNSLDFSRLKLSIGGGMAVQKAVADKWQSITKTRLLEGYGLT
EASPLVTCCPYNLDGYNGSIGFPAPSTDIQVRDDEGNVLAQGETGELFAKGPQVMQGYWQ
RPEETAKVIDKDGWLATGDIGYMDEKGFFFIVDRKKDMILVSGFNVFPNEVEDVIALHPK
VIEVAAVGVPNEASGELVKVFVVAKDNSLTDSDIIKHCRHHLTGYKVPKLVEFRDELPKS
NVGKILRRELRDEVKSA
NT seq 1674 nt   +upstreamnt  +downstreamnt
gtggaccagccttggattaataatttaccagaacacgtaccggcagaaattgactcagcg
caattttcaacccttgtcgatatgtttgaatctgcggtagctaaatatgctgaccaacct
gcgtttatcaatatgggggcgacactgacttataggaagttagaagaaagaagtcgtgca
tttgcagcctatttacaaaatgaactcaagttagaaaaaggcgacagagtcgccttgatg
atgcctaatttactgcaatacccaattgcattatttggtgtattacgtgcgggcatggtc
gtggttaatgttaaccctctatataccccaagagaattaaaacatcagttagttgattct
ggtgctaaagccattgtcgttgtgtcgaattttgcacgtacattggaagaagtagtttca
gaaacgcctgtagaatcggtgatcatcactgggttaggtgatcaactgagtgcacccaaa
agaaccttagtcaacttcgtggttaagtacatcaagaagatggtgcctaaatacaacttg
ccccatgcattgtcttttaggcagtctttaagtaaaggccgtcgtttacaatacgtaaaa
cctgagatttcaccagaggatttgtctttcttgcaatataccggtggtactacgggtgtt
tcaaaaggcgcgatgttgagtcataaaaacgttgtgagtaatgttttgcaagccaatggt
gcctattcgccagctttgaaagatggtaccgaatttgtcgttactgcattgccgctttat
cacatcttcgcactcactgttaactgtttgctgtttttacataaaggcagtaaaaactta
ttaattactaaccctcgtgatttaccagcgttcgttggcgagttaaagaagtatcctttt
acagcgctgacaggggttaacacgttattcaacgccctagttaatgatgaagactttaat
agtcttgatttcagccgcttaaagctttctattggcggcggaatggccgtacaaaaagcc
gttgctgacaaatggcaaagcattactaagacacgattacttgaaggttatgggttaact
gaagcatcgccactggtaacgtgttgtccttataatcttgatggttataacggatcaatt
ggtttccctgcgccttcaactgacatacaagtgcgtgatgatgaaggtaatgtattagcc
caaggtgaaactggtgagctatttgcgaaaggtccgcaagtcatgcaaggctactggcag
cgaccagaagaaacagcaaaagtcatcgacaaagacggttggctagcgactggtgatatt
ggctatatggatgaaaaaggattctttttcattgttgaccgtaaaaaagacatgattttg
gtatcaggttttaatgtatttccaaatgaagttgaagatgtcattgcactgcatcctaaa
gtcattgaggttgcggctgttggtgttccaaatgaagccagcggtgaattagttaaagta
tttgtcgtcgcaaaagataacagcttaactgatagcgatattattaaacattgtcgtcat
catttaacaggatataaggtaccaaagctggtagaattcagagatgagttaccaaaatcc
aatgtaggtaagattttacgacgagagcttcgagacgaagttaaatcagcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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