KEGG   Salimicrobium jeotgali: AAV35_006860
Entry
AAV35_006860      CDS       T04359                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
sje  Salimicrobium jeotgali
Pathway
sje03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sje00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAV35_006860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sje03019]
    AAV35_006860
   03016 Transfer RNA biogenesis [BR:sje03016]
    AAV35_006860
Enzymes [BR:sje01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AAV35_006860
Messenger RNA biogenesis [BR:sje03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AAV35_006860
Transfer RNA biogenesis [BR:sje03016]
 Prokaryotic type
  tRNA degradation factors
   AAV35_006860
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 SPATA25 S1_2
Other DBs
NCBI-ProteinID: AKG04538
UniProt: K2GQU8
Position
complement(1382416..1384548)
AA seq 710 aa
MTDNKQVFSIDIGGQKLSVEIGEMAKQANGAAMISYGDTSVLSTATGSKEPKDLPFFPLT
INYEERLYAVGKIPGGFIKREGRPSDKAVLTARLIDRPIRPLFPDGFRNDIQVINTVMSV
DQDCSSEIAAMIGSSIALSVSDLPFAGPIAGVIVGRVDGKFVINPTVEQQKASDIDLTVA
GTKDAVNMVEAGALEVPEADMLEAIMFGHEEIKRLVEFQEEIIKAAGKEKMEVQLLSNDE
QLQQKTEREATASIVEAIQINDKKAREEAIDKAKNDYLDKVAEEELEEEEISQIKSILDD
IVKAEVRRLITKEKIRPDGRSPREIRPLTSRVDVLPRTHGSGMFTRGQTQALSVCTLGAL
GEVQILDGLDLEESKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALEVVIPSEE
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGDDYTILT
DIQGMEDFLGDMDFKVAGTEKGVTALQMDIKIEGLSRDILKEALEQAKKGRMDILGHMLE
VMPSTRSELSSYAPKIMKMSINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
QNSEMNENAKKVIEDIVRDVEVGEVYDGTVKRVEKFGAFVELFKGKEGLVHISELAEEHI
KKTEDVANVGDTLTVKVKEIDRQGRINLSRKAILVEQKEKEQSEEGQQTE
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgacagataataaacaagtgttttctattgatatcggcggtcagaagctgtcggtggaa
ataggtgaaatggcaaagcaggcgaatggagcagcgatgatcagctatggtgatacatcg
gttctttccacagcgaccggttccaaagagccgaaagaccttccgtttttcccgttgact
attaactatgaagaacgtctatatgccgtagggaaaataccgggcggtttcattaagcgc
gaagggcgtccgagcgacaaagcggttttgactgctcgtttgattgatcgcccgatcaga
ccgctgttcccggacggattccggaacgatatccaggttatcaacactgtgatgagtgta
gatcaggactgttcctccgaaatcgcagcgatgataggttcttctattgcactcagtgtc
tccgatctcccgttcgcgggaccgatcgccggggttatcgtcggacgggtggacggaaaa
ttcgtcatcaacccgaccgtcgaacagcagaaagcgagtgacatcgatttaacagtggcc
ggaacgaaagacgctgtcaacatggtagaggcaggagcacttgaagttccggaagcggat
atgcttgaagcgataatgttcgggcatgaagagattaaacgcctggtggaatttcaggaa
gagatcattaaagctgccggaaaagaaaaaatggaagtgcaacttctttcaaatgatgaa
cagcttcaacagaagacggaaagggaagctacggcttccatagtcgaagctatccagatt
aatgataaaaaagcgcgggaagaagcgatcgataaggctaagaacgactacctggataaa
gtcgccgaagaggaattggaagaagaagagattagtcagatcaagtccatccttgacgat
attgtaaaagccgaggtacgcaggctgattacaaaagagaaaataagacctgacggcaga
agtccgcgtgaaatccgacctcttacctcaagagtggatgtgctgccacgtacacacggg
tcggggatgttcacccgtggtcagacccaggcgctcagcgtatgtacacttggggcactg
ggtgaagtccagattctggatggcctggacctggaagaatcaaaacgcttcatgcaccat
tacaattttccgaacttctccgtcggtgaaacaggaccgatacgcggtccgggccgtcgt
gaaatcggccacggagctttgggggaaagagcgcttgaagtggtcattccatccgaagag
gaatttccgtacactatacggctcgtttccgaagtgcttgaatccaacggttccacttcc
caggccagtatatgtgccagtactcttgcaatgatggatgccggtgtgccgatcaaagca
cccgtagccggtatcgccatgggccttgtgaaatcaggggacgattatacgattctgaca
gatattcagggaatggaagactttctcggagatatggattttaaagtagccggtaccgaa
aagggtgtcactgccctgcagatggacattaagattgaaggtctttcaagagatattttg
aaagaggcgctggaacaggcgaaaaaaggaagaatggacatactcggtcacatgcttgaa
gtaatgccttccacacgcagtgaactgtcctcctacgctcctaaaattatgaaaatgtcg
atcaaccctgataaaattcgtgatgtcattggtccgagcggtaaacagatcaataaaatc
atcgaagaaacaggagtgaaaatcgatattgagcaggatggaactgttttcatttcctct
caaaacagtgaaatgaatgaaaacgccaaaaaagtgatcgaagatatcgttcgtgacgta
gaagtgggagaagtatatgatggtacagtgaaacgggtggagaaattcggagccttcgtg
gaactgttcaaaggcaaagaaggcctcgtacacatctccgagctggcggaagaacacatt
aaaaaaactgaagacgtagccaatgtaggggatacgctgacagtaaaagtgaaagagatc
gacagacagggacggataaacctttccagaaaagcgatccttgtggaacagaaagaaaaa
gagcagagtgaagaaggacagcagacggagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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