KEGG   Sphingobium indicum UT26S: SJA_C1-15000
Entry
SJA_C1-15000      CDS       T01201                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp00300  Lysine biosynthesis
sjp00470  D-Amino acid metabolism
sjp01100  Metabolic pathways
sjp01110  Biosynthesis of secondary metabolites
sjp01120  Microbial metabolism in diverse environments
sjp01230  Biosynthesis of amino acids
Module
sjp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SJA_C1-15000 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SJA_C1-15000 (lysA)
Enzymes [BR:sjp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SJA_C1-15000 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BAI96334
NITE: SJA_C1-15000
UniProt: D4Z152
Position
1:1494590..1495822
AA seq 410 aa
MKPMGPIPPFFAGEEGMLLIGGCGAASLVEEAGDTPLFVYDMGIVEGQARAFRDAMPAAL
SLHYAVKANPHALLLERMAKLVDGFDVASGGELARALEAGMDAAHISFAGPGKRDDELIV
AIDSGATINLESEGEARRAIALAERRGRTPKLAVRVNPDFDLKGSGMRMGGGAKPFGVDA
ERAAALARRVIEAGGEWRGWHIFAGSQALGAQALIETQAATVDLAARLSEAVGAAPPLVN
LGGGFGIPYFPGDERLDIRPIGDALGGMLDRRADILQDSAFAMELGRWLVGEAGVYLTRI
VDVKKSQGETFVVVDGGLHHQLAASGNFGTVVRRNYPIAVANRFGEASAEDAVTVVGCLC
TPIDRLGDKVALPPVEEGDLVAIFLAGAYGASASPAAFLGHPAPRELLIG
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgaagccgatgggaccgatcccgcccttcttcgcgggcgaggagggcatgttgctgatc
ggcggctgcggcgcggcgagcctggtcgaggaggccggggacacgccgctgttcgtctat
gacatgggcatcgtcgaggggcaggcgcgggcctttcgcgacgccatgcccgcggcgctg
tcgctccattatgcggtgaaggccaatccccatgccctcctgctggagcggatggcgaag
ctggtggacggattcgacgtggcgtcgggcggggaactggcgcgggcgctggaggcgggg
atggacgctgcccatatcagcttcgccgggccgggaaagcgcgacgatgaactgatcgtc
gccatagacagcggcgcgacgatcaacctggagtcggagggcgaggcgcggcgggccatc
gcgctcgcggagcggcgcggcaggacgccgaagctggcggtgcgggtgaacccggatttc
gacctgaaagggtccggcatgcgcatgggcggcggcgccaagcccttcggcgtggacgcg
gagcgcgcggcggcgctggcgcgccgggtgatcgaggccgggggcgagtggcgcggctgg
catatcttcgccggcagccaggcgctgggggcgcaggcgctgatcgagacgcaggcggcg
acggtcgatctcgccgcccgcctgtccgaagcggtgggggcggcgccgccgctggtcaat
ctgggcggcggcttcggcattccctatttccccggcgacgaacggctggacatccggccc
atcggggatgcgctgggcgggatgctcgaccggcgggcggacatattgcaggacagcgcc
ttcgccatggaactgggccgctggctggtgggggaggcgggcgtttacctgacccgcatc
gtcgatgtgaagaagagccagggcgaaaccttcgtcgtcgtcgacggcgggctgcaccat
caactcgcggcgagcggcaatttcggcacggtggtgcgccgcaactatcccatcgccgtc
gccaatcgcttcggagaagcctcggcggaggatgccgtgacggtcgtgggttgcctctgc
acgcccatcgacaggctgggcgacaaggtcgcgctgccgccggtggaggagggcgacctg
gtcgcgatcttcctggcgggggcctatggcgcctcggccagtccggctgcctttctgggt
cacccggcgcctcgggaactgctgatcggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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