KEGG   Sphingobium indicum UT26S: SJA_C1-19990
Entry
SJA_C1-19990      CDS       T01201                                 
Symbol
trbB
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SJA_C1-19990 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sjp02044]
    SJA_C1-19990 (trbB)
Enzymes [BR:sjp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SJA_C1-19990 (trbB)
Secretion system [BR:sjp02044]
 Type IV secretion system
  Trb secretion system protein
   SJA_C1-19990 (trbB)
SSDB
Motif
Pfam: T2SSE Zeta_toxin TrwB_AAD_bind AAA_16 AAA_30 FtsK_SpoIIIE AAA_19 DEAD AAA_28 MMR_HSR1 ATPase ABC_ATPase nSTAND3 GTP_EFTU CbiA DnaB_C AAA_7 Septin P-loop_TraG AAA_22 DUF815 ResIII
Other DBs
NCBI-ProteinID: BAI96833
UniProt: D4Z2K1
Position
1:complement(1995829..1996773)
AA seq 314 aa
MLRTALGPAIGRFLEDPSVVEVMLNPDGRIWIDRLSEGLSDTGEYMSPADGERIVRLVAH
HVGAEVHAGAPRVSAELPETGERFEGLLPPVVMAPTFAIRKPAVAVFSLDDYVRAGIMSA
GQADALRQGVASRANILVAGGTSTGKTTLTNALLAEVAKTADRVVIIEDTRELQCAAPNL
VAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAWGTGHPGGVGTIHAGSA
IGALRRMEQLIQEAVVTVPRVLIAETIDLVAVLSGRGSARRLTELARVEGLGPDGDYRVA
HAAIFPQPEEGASS
NT seq 945 nt   +upstreamnt  +downstreamnt
atgctgcgcactgcgctcggtcctgccatcggccggtttctggaagacccgtccgtcgtc
gaggtgatgctgaacccggacgggcgcatctggatcgaccggctctccgaaggactgtcc
gacacgggcgaatatatgtcgccggcggatggcgagcgcatcgtgcgcctcgtcgcacac
catgttggcgcagaagtccatgccggggcgcctcgtgtctcggccgagctgcccgagacg
ggagaacgcttcgagggacttctgccgcccgtggtgatggcgccgaccttcgcgatccgc
aaacccgccgtcgcggtgttctcgctcgacgactatgttcgggccgggatcatgtccgcc
gggcaggccgacgcgctgcgccaaggcgtcgcttcgcgcgccaacattcttgtcgcgggc
ggcacttccaccggcaagacgacgctgaccaacgcgctgctcgccgaggtggcaaagacc
gccgatcgcgtcgtcatcatcgaggatacgcgcgaactgcaatgcgccgcgcccaacctc
gttgcgatgcgcaccaaggatggcgtcgcctcgctctccgatctcgtccgctcctcgttg
cgcttgcgtcctgatcgcatccccatcggcgaggtgcgcggcgcggaggcgctggacctt
ctgaaagcatggggcaccggacatcctggcggcgtcggcacaatccacgccggcagcgcc
atcggcgcgctgcggcgcatggaacaactcatccaggaagcagtcgtcaccgttccgcgc
gtcttgatcgccgagacgatcgacctcgtggccgtcctttccggccgcggttccgcgcgc
cggctcaccgaactcgcccgtgtcgagggcctcggcccggacggcgattaccgcgtcgca
cacgccgccattttcccccagcccgaagaaggagcttcctcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (33)   

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