KEGG   Sphingobium indicum UT26S: SJA_C1-29640
Entry
SJA_C1-29640      CDS       T01201                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SJA_C1-29640 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sjp02044]
    SJA_C1-29640 (trbF)
Secretion system [BR:sjp02044]
 Type IV secretion system
  Trb secretion system protein
   SJA_C1-29640 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: BAI97798
UniProt: D4Z5B6
Position
1:complement(2953944..2954720)
AA seq 258 aa
MIFRRAVQRYGQTPAPETPYQRAGQLWEERIGSARVQARNWRLMAFGTLALSSAMASGLI
WQSLQSRVVPYVVEVDRLGEARAVSQAEADYQPTDPQIAYQLARFIENVRGVSLDPVLMR
RNWLQAYDFASERGAIFLGEYARVRQPFARIGEQTASVQVTSVLRASNRSFQVKWTESEY
ERGSQAGSSRWTAILTIVTKVPRTADDLRRNPLGIYVDAIDWSREIEGDATQLPSAPSRT
AAATAISNPSADRMEAQP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgatctttcgacgagcagtccagcgttatgggcagactcccgcgcccgaaacgccgtac
cagcgagcgggccagctctgggaagagcggatcggaagcgcgcgcgtgcaggcgcggaac
tggcgattaatggctttcggtacgttggccttgtcaagcgcgatggcatcaggcctgatc
tggcaatcgctgcaaagccgcgttgtgccctatgtcgtagaggtggatcgactgggtgag
gcgagggcggtgtcgcaggccgaggcggattatcagccgaccgatccgcaaatcgcctat
cagctggcgcgcttcatagagaatgtgcgcggcgtgtcgctcgatcctgtgctgatgcgc
cggaactggttgcaggcttatgattttgccagcgaacggggcgccattttcctcggggaa
tatgcgcgggtgcggcaacccttcgcccggatcggcgaacagacggcttcggtgcaggtg
acgagcgtcctgcgcgcgtcgaacaggtcctttcaggtgaaatggaccgagagcgaatat
gagcggggaagtcaggctggctcgtcgcgctggacggcgatattgaccatcgtcaccaag
gttccgcgaaccgccgatgatctccgccgtaatccgctcggcatctatgttgatgcgatt
gactggagccgggagatcgagggcgacgccacccagctaccatcggccccgtcccggaca
gcggcggcaacagccatttccaacccatcggccgacaggatggaggcgcagccatga

  All links  
Gene (8)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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