KEGG   Sphingobium indicum UT26S: SJA_C2-03280
Entry
SJA_C2-03280      CDS       T01201                                 
Name
(GenBank) RND-family efflux transporter
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp01501  beta-Lactam resistance
sjp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SJA_C2-03280
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SJA_C2-03280
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sjp02000]
    SJA_C2-03280
   01504 Antimicrobial resistance genes [BR:sjp01504]
    SJA_C2-03280
Transporters [BR:sjp02000]
 Other transporters
  Pores ion channels [TC:1]
   SJA_C2-03280
Antimicrobial resistance genes [BR:sjp01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    SJA_C2-03280
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    SJA_C2-03280
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    SJA_C2-03280
SSDB
Motif
Pfam: OEP LPAM_1
Other DBs
NCBI-ProteinID: BAI98691
NITE: SJA_C2-03280
UniProt: D4Z872
Position
2:405633..407009
AA seq 458 aa
MRRALCALASAAALSGCNMAPTYVRPAPPVPASLPSGPAYAPATATEKPGLPWTALIGDA
GLKTVIGRALDNNRDLRAALANVEAARALYRVQRAERLPAVTGEAAAGFTRRNDARQNSY
SADIGFSAFEIDLFGRVKNLTRSALESYLATEEGARATRIALIAETATAYATLAADQDYL
DLSRRTLANAERTLALTRSLNGAGLIGKLDVHQAETTVEQARSDIAANLTQVAQDRNALD
LLVGAPVEDALLPRSLQELTPDVAKVPAGLSSDVLLQRPDVLQAEHQLKAANADIGAARA
AMFPRISLTAAIGVASSALSSLFTGDGFAWSAAPSASMPIFGGAARGNLSYSKAQRDLSL
ARYEKAIQTAFQEVSDALAREGTIDEQQAAQQRLVLASQRSYKLAEERYRAGIDTFLNSL
TSQRSLYNAQQSAIATNLAMIRNRILLYRVIGADFREG
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaggcgcgccctgtgcgccctcgcttcggcggctgccctgtcgggttgcaacatggcg
ccgacctatgtccggcccgcccccccggtgcccgccagcctccccagcggcccggcctat
gcgcctgcgacggcgacggaaaaacccggcctgccctggaccgcgctgatcggcgatgcc
ggcctgaagacagtgatcgggcgagcgctcgacaataatcgcgacctgcgcgccgccctc
gccaatgtggaggccgcccgcgccctttaccgggtgcagcgcgccgaacggctgcccgcc
gtcacgggcgaggcggcagccggctttacccggcggaacgacgcccgccagaacagctac
agcgccgacatcggcttcagcgcgttcgagatcgacctgttcggccgggtgaagaacctg
acccggtcggcgctggaatcctatctggcgaccgaggaaggggcgcgggccacccgcatc
gccctgatcgcggaaacggccacggcctatgcgaccttggccgccgatcaggattatctg
gacctttcccgccggacattggccaatgccgaacgcacgctcgccctcacccggtcgctg
aacggcgcgggattgatcggcaagctggacgtccaccaggccgaaaccacggtggaacag
gcgcgcagcgacattgccgcgaacctcacccaggtggcgcaggaccggaatgcgctggac
ctgctggtcggcgcgccggtcgaagatgcgctgctgccccggtcgttgcaggaactcacc
cccgacgttgcgaaggtgccggcgggcctttcctccgacgtgctgctccagcggccggac
gtgctgcaggcggaacatcaactgaaggccgccaatgccgacatcggcgcggcgcgggcc
gcgatgttcccgaggatcagcctgaccgcggccatcggcgtagccagttcggccctgtcg
tcgcttttcacgggcgacggcttcgcctggtcggcggcgccctccgccagcatgccgatc
ttcgggggcgcggccagaggcaatctgtcctacagcaaggcgcagcgcgacctcagcctc
gcccgatatgaaaaggcgatccagaccgcctttcaggaggtgtccgacgcgctggcgcgt
gaaggcacgatagacgagcagcaggctgcgcagcagcggctggtcctcgccagccagcgg
agctacaagctggccgaggaacgctatcgcgccggcatagacactttcctcaacagcctg
accagccagagaagcctttacaacgcgcagcagagcgcgatcgcgacgaacctggcgatg
atcaggaaccgcatcctgctctaccgggtcatcggggcggatttccgggaagggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (2)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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