KEGG   Shewanella khirikhana: STH12_01550
Entry
STH12_01550       CDS       T06711                                 
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
skh  Shewanella khirikhana
Pathway
skh00730  Thiamine metabolism
skh01100  Metabolic pathways
skh01240  Biosynthesis of cofactors
Module
skh_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:skh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    STH12_01550 (thiC)
Enzymes [BR:skh01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     STH12_01550 (thiC)
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated zf-HC3
Other DBs
NCBI-ProteinID: AZQ10659
UniProt: A0A3Q9E7J2
Position
complement(1767159..1769171)
AA seq 670 aa
MSNRRETRKAAQDFIDNLKPLRRPNSEKIFIEGSRPDIQVGMRQIHQTDTRIVNTRGEET
FEANPPIKVYDCAGPYSDPEAEINVRHGLPKLREGWILARCDTEELNSASSNFTQQRLAD
EGLDHLRFDVLPKPRRAKAGKRVTQLHYARQGIITPEMEYIAIRENMARDEVTDEQLNRK
KPGEAFGALVGKSITPEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSA
VTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQALEKVN
GIAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCL
SHHQENFLYTHFREICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKIAW
EYDVQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSGIGAAM
IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNALSKAR
FEFRWEDQYNLGLDPDTARAYHDETLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASL
ESAASLENPANKHPDAVQTVEVGAAESYSKAESYAKAGMDKMSATFKETGSALYSEAHVD
AARKAEQELV
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtcaaaccgccgcgaaacccgtaaagccgcccaggactttatcgataacttaaagccg
ctgcgccgccccaattccgaaaagatttttattgaaggctcccggcctgatatccaggtg
ggcatgcgtcaaattcatcaaaccgatacccgcatcgtgaacacccgcggcgaagaaacc
ttcgaggccaatccgcccatcaaggtatacgactgcgccggaccgtattcagatcccgaa
gctgaaatcaatgtgcgccacggcctgccaaaactgcgtgagggctggattttagcgcgc
tgcgatacagaagagcttaacagcgcctcatccaactttacccagcagcgtctcgccgat
gaggggctggatcacctgcgttttgacgtgctgccaaagccgcgccgcgccaaggctggc
aagcgggtcacccagctgcactatgcccgtcagggtattatcaccccggagatggaatac
atcgccattcgtgagaacatggcccgcgatgaagtgaccgacgagcagcttaaccgcaaa
aagcccggcgaagcctttggtgctttggttggtaagtccatcactcctgagtttgtccgt
gacgaagtggcccgtggccgggcgattattccggccaacatcaaccaccctgaagctgag
cctatgatcattggccgcaactttttggtgaaggtgaacgccaatatcggcaactcggcg
gtgacttcttccatcgaggaagaagtggaaaaactggtgtggtccacccgctggggcgca
gatactgtgatggacctgtccaccggccgttatattcacgagacccgcgaatggattgtg
cgcaactcaccggtgcccattggcactgtgcccatctatcaggcgctggagaaggttaac
ggcatcgccgaagatcttaactgggaagtgttccgcgacaccctgattgagcaggccgag
cagggggtggattacttcaccatccacgcgggtgtgctcttgcgctacgtgcccatgacc
gccaagcgggttaccggcatagtgtcccgcggcggctccatcatggccaagtggtgctta
agtcaccatcaggaaaacttcctctacacccatttccgtgagatctgcgagctttgcgcc
gcctatgatgtatcgctgtcgctgggtgatggcatgcgcccgggctccattgccgatgcc
aatgacgaagcccagtttgctgagctcgaaacccttggcgagcttgtgaaaatcgcctgg
gaatacgatgtgcaaaccattatcgaaggcccgggccatattccgatgcagctcatcaaa
gagaacatggataagcagcttgagcactgcgccgaggcgccgttttataccctcggcccc
cagaccaccgacattgctccgggctacgatcacttcacctcgggcattggcgcggcgatg
attgcctggtacggctgcgccatgctctgctacgtaacgcccaaggagcacttgggtctg
cccaacaaggaagatgtaaaacaaggccttatcgcttacaagattgccgcccacgcagcc
gatgtggccaaggggcatcccggcgcgcaaattcgcgacaacgcgctttccaaggcacga
ttcgagtttcgctgggaagatcagtacaacctcgggctcgatcccgatactgcccgagcc
tatcacgatgagaccctgccgcaggagtcggccaaggtggcccatttctgctccatgtgc
ggccccaagttctgctcaatgaaaatcacccaggacgtacgtgactatgctgccagttta
gagtctgcagccagcttggagaatcctgccaacaagcacccggacgctgtacaaacggtg
gaagtgggcgcggctgaaagttattccaaagccgaaagctatgccaaggcgggtatggac
aagatgtcggccaccttcaaagaaaccggtagcgcactttacagcgaggcccacgtcgat
gcggcgcgcaaggccgagcaggaactggtgtaa

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