KEGG   Shewanella khirikhana: STH12_01593
Entry
STH12_01593       CDS       T06711                                 
Symbol
ddl_1
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
skh  Shewanella khirikhana
Pathway
skh00470  D-Amino acid metabolism
skh00550  Peptidoglycan biosynthesis
skh01100  Metabolic pathways
skh01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:skh00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    STH12_01593 (ddl_1)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    STH12_01593 (ddl_1)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    STH12_01593 (ddl_1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:skh01011]
    STH12_01593 (ddl_1)
Enzymes [BR:skh01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     STH12_01593 (ddl_1)
Peptidoglycan biosynthesis and degradation proteins [BR:skh01011]
 Precursor biosynthesis
  Amino acid ligase
   STH12_01593 (ddl_1)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp DUF3110
Other DBs
NCBI-ProteinID: AZQ10701
UniProt: A0A3Q9E5H5
Position
1832568..1833578
AA seq 336 aa
MKKYNLVLLCGGGGSEHDISLLSAKYFEACLSDHPRFNTLWLELSANGEYRTKEGEIVEL
TNRRDIRFADDTKAAWPVDYIIPCIHGFPGETGDIQSWFNLIQLPYFGCGSEASSNCFNK
ITAKMWFSALGIPNTPYLYLDEPSDDAIARVERAFDEWNGVFIKAASQGSSVGCFPATKR
EDIPALVKKAFEYAPFVVVEKTIVARELEVAVYEYDGELVATRPGEIVCAANTFYSFEEK
YDAKSQAVTHVEAPDVDEATVEAIRDYALRAFKGMKLRHLSRIDFFLTRDNQILLNEINT
FPGLTQISMFPKMLANHGHDFTTFLEKAILAELEGA
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgaaaaaatacaatctggtgctgctttgcggcggcggtggcagcgagcatgacatttcc
ttgttgtcggccaaatactttgaagcctgcctcagtgaccatccccgcttcaacaccctg
tggctggaactgagcgccaacggcgagtaccgcaccaaggaaggcgagattgtcgagctg
accaaccgccgcgacattcgctttgccgatgacaccaaggcggcctggccggtggattac
atcatcccttgtattcacggtttccccggcgaaaccggcgatattcagtcctggtttaac
ctcatccaattgccctactttggctgcggctcagaagcgtccagcaattgtttcaacaag
atcaccgccaagatgtggttcagcgcccttgggatccccaacaccccttacctgtacctg
gacgagcccagtgatgacgctatcgcccgggtagaacgtgcattcgatgaatggaatggt
gtctttatcaaggccgcgagccaaggctcatctgtgggctgcttcccggccaccaagcgt
gaagacattccggcgctggtcaaaaaagccttcgagtacgcgcctttcgtggtggtggaa
aaaaccattgtcgcccgcgagctggaagtggcggtgtacgaatacgatggcgagctggtg
gccacccgtccgggcgagattgtttgtgcggccaacaccttctacagctttgaagaaaaa
tacgatgccaagagccaagcggtaacccatgtggaagcgcccgatgtggatgaagccacg
gttgaggccatccgcgactatgcactcagggcatttaaaggcatgaagctgcgccatctg
tcgcggattgacttcttcctcaccagagacaaccaaatcctgctgaatgaaatcaatacc
ttccccggcctaacccagatttccatgtttcccaagatgctggccaatcacggccatgac
tttaccaccttccttgaaaaggccattctggccgagctcgaaggtgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system