KEGG   Shewanella khirikhana: STH12_02853
Entry
STH12_02853       CDS       T06711                                 
Name
(GenBank) Dioxygenase
  KO
K00449  protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
Organism
skh  Shewanella khirikhana
Pathway
skh00362  Benzoate degradation
skh01100  Metabolic pathways
skh01120  Microbial metabolism in diverse environments
skh01220  Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:skh00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    STH12_02853
   00624 Polycyclic aromatic hydrocarbon degradation
    STH12_02853
Enzymes [BR:skh01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.3  protocatechuate 3,4-dioxygenase
     STH12_02853
SSDB
Motif
Pfam: Dioxygenase_C CarboxypepD_reg MetallophosN
Other DBs
NCBI-ProteinID: AZQ11922
UniProt: A0A3Q9E8W5
Position
complement(3249445..3250047)
AA seq 200 aa
MANIKLLAGVLLFWGGNIAAQEPVPVIGGPCQGCELVFVDMPASLTSSGRIAPVGEQGSL
LVVRGSVHSADGSQAQGIIVYAYQTDARGAYPKGSTQHGGLRGWAQTDANGRYQLETIRP
AAYVGRDIPQHIHMHVIEPNKGTYYIDDITFDDDPLLTTEKRDKKLCRGGCGISHPQRDE
QGVWHVRRDITLGKNIPDYR
NT seq 603 nt   +upstreamnt  +downstreamnt
atggctaacattaagttactggctggtgttttgttattttggggcgggaatatcgctgca
caggagcctgttccggttattggtggtccgtgtcagggatgtgagttggtttttgtagat
atgccagcgtcgctgacaagcagcgggcgaatagcgcctgtgggggagcagggcagctta
cttgtcgttcgtggttcagtacacagcgctgatggcagccaggcccagggtatcatagtg
tacgcctatcaaactgatgccagaggcgcttaccccaaaggctcgactcagcacggtggc
ctgaggggctgggcgcaaaccgacgcaaatggacgttatcagctcgagactatacgccca
gctgcttacgtagggcgagatattccgcagcacatccacatgcatgttatagagcctaat
aaagggacttattatattgacgacattacttttgatgatgaccctttgctaacgacagaa
aaaagagacaaaaagctttgtcgcggcggctgtggcatcagtcatccacagcgtgatgag
cagggcgtttggcatgttcgccgcgatattaccctggggaaaaatataccggattatcga
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system