KEGG   Streptococcus koreensis: D7D50_00525
Entry
D7D50_00525       CDS       T06405                                 
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
ski  Streptococcus koreensis
Brite
KEGG Orthology (KO) [BR:ski00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ski03009]
    D7D50_00525 (rsmB)
Enzymes [BR:ski01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     D7D50_00525 (rsmB)
Ribosome biogenesis [BR:ski03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    D7D50_00525 (rsmB)
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB Methyltransf_31 Methyltransf_15 Methyltransf_3 FtsJ Methyltransf_25 TRM Met_10 UPF0020 LpoB MTS DnaB_2
Other DBs
NCBI-ProteinID: AYF93217
Position
complement(82613..83926)
AA seq 437 aa
MVNKLQTARGLALSTLGEIFQDGAFSNIALKKALGKSTLSEVDKSLVTEIVYGTVSRKLT
LEWYLSHFVADRDQVDPWIYHLLLMSLYQFVYLEKIPPHAVVHEAVELAKQRKKGSEKYV
NALLRKMLREGLPSIDQIKRVNKRLSIRYSLPVWLVKKLLDEYGKKRAIAIFESLYVRNK
ASVRVVDLDQKEDIKEQLQASDSLLASTALVKENGYFAGSDYFKQGKITIQDETSQLVAP
ALEIQPTDQVLDACAAPGGKTTHLASYLVDGKITALDLYDHKLQLIQENAERLGVADKIQ
TKKLDASKVFEAFGADAFDKILVDAPCSGIGLIRRKPDIKYNKDNADFASLQAIQLEILD
GVCQSVRKDGIIVYSTCTIIGEENFDVVHQFLETHPNFELVPLDHERKDILKDGCMLITP
ELYGSDGFFISRFRRIS
NT seq 1314 nt   +upstreamnt  +downstreamnt
ttggtaaataagctacagactgcacgtggattggccctctctaccctaggagagattttc
caggacggtgctttttcaaatatcgccctcaaaaaagctctgggaaagtcaactttgtca
gaagtggataaaagtctggtgactgaaattgtctatgggacggtttcgcgtaaactaacc
ttggaatggtatctatcgcactttgtcgctgatcgagaccaggtagacccatggatttat
catcttttattgatgagcctttatcagttcgtctatcttgagaagattcctccccatgct
gttgtccatgaagcagtagagcttgccaagcaacggaagaaggggagcgaaaaatatgtc
aatgctctcttacggaaaatgctacgagaggggcttccgtcgattgaccagattaaacga
gtcaacaaacgactttcgatccgttattcactaccggtttggttggtgaaaaagttgctt
gatgagtatgggaaaaagcgggcaatcgctatttttgaaagtctctatgttcgcaacaag
gccagtgttcgagttgttgaccttgaccaaaaagaagacatcaaggaacagttgcaggct
tcggattccttattggcctcaacagctcttgtaaaggaaaacggctattttgcgggctct
gattacttcaaacaaggaaagataaccatccaagatgagaccagtcaattggtggcacct
gctttggaaattcaacctacggatcaggtgctggatgcctgtgcagctcctggtggcaag
accactcatctagcttcttatctagtcgatgggaagattacagctttggacttgtacgat
cataagctccaattaattcaggaaaacgcggagcgtcttggagtagcagataaaatccag
acaaaaaaactggatgccagcaaggtatttgaagcttttggggcggatgccttcgataaa
atcttggtagatgccccttgctctgggattggtttgatccgccgaaagccagacatcaag
tataataaagataatgctgactttgcgtctctgcaggcgattcaattggaaatattggat
ggagtttgtcaaagtgtacggaaagatggtataatagtctacagtacatgcacaattata
ggagaagagaattttgatgtggttcaccagtttttagaaacccatccaaattttgaactc
gtgccattagatcatgaacgaaaagatattctgaaagatggttgtatgttaattacacca
gaattgtatggaagcgatggtttctttattagtcgttttcgaagaatatcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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