KEGG   Staphylococcus kloosii: C7J89_05565
Entry
C7J89_05565       CDS       T05401                                 
Name
(GenBank) ATP-dependent helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
skl  Staphylococcus kloosii
Pathway
skl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:skl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C7J89_05565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:skl03019]
    C7J89_05565
   03009 Ribosome biogenesis [BR:skl03009]
    C7J89_05565
Messenger RNA biogenesis [BR:skl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     C7J89_05565
Ribosome biogenesis [BR:skl03009]
 Prokaryotic type
  rRNA helicases
   C7J89_05565
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 UBA CMS1 Flavi_DEAD
Other DBs
NCBI-ProteinID: AVQ35645
UniProt: A0A151A0R4
Position
1139048..1140553
AA seq 501 aa
MQNFKELGISAKTVETLESMGFTEATPIQKDSIPLALAGRDVLGQAQTGTGKTGAFGIPL
IEKVVGKEGVQSLILAPTRELAMQVAEQLKEFSKDQKVQVVTIFGGMPIDRQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTTGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTML
FSATMPKAIQNLVQQFMNSPEIVKTMDNKMSNPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEQANN
RQMNALRPPHRKEVLKARENDIKEKVQNWMSKDNEPRLQRIAGQLLEEYNDVELVASLLQ
ELVEANDEVEVQLTFEKPLARKGRPSKGPRRNNNNKRGNKFDNKGRRGKPAFNKKGKKDR
TSDRKDNKKSMKGRTFADHQK
NT seq 1506 nt   +upstreamnt  +downstreamnt
ttgcaaaattttaaagaattagggatatcggctaaaacagtagaaaccctagaatcaatg
gggtttacagaagccacaccaattcaaaaggatagtattccacttgcattagcaggtaga
gacgtattaggacaagctcaaacaggtactggtaaaacaggtgcttttggtattccttta
atcgaaaaagtagtaggtaaagaaggcgtgcaatctttaatcttagcacctacaagagaa
ttagcgatgcaagttgctgaacaattaaaagagtttagtaaagatcaaaaagtacaagta
gttacaatttttggtggtatgccaattgatcgtcaaattaaagcattgaaaaaaggacct
caaatcgtagttggtactccaggacgtgttatagaccatttaaatcgtcgtactttaaaa
actacaggtatccacactttaatcctagacgaagcagatgaaatgatgaacatgggcttt
atagatgatatgagatttatcatggataaaattccagcagaacaacgtcaaacgatgcta
ttctcagctacgatgcctaaagctattcaaaacttagttcaacaatttatgaactcacct
gagattgtcaaaacaatggataacaaaatgtcaaatccacaaattgacgaatactatact
atcgttaaagaattagaaaaatttgatacatttacgaacttcttagatgtacatcaacca
gagttagctatcgtattcggtagaacaaaacgtcgtgttgatgaattaacaagtgcgtta
ttatctaaaggttataaagctgagggattacatggtgatatcactcaagctaaacgatta
gaagtcttgaaaaaattcaaaaatgatcaaatcgacattttagtagctacagatgttgct
gctcgtggattagatatttctggcgtaagtcatgtttataactttgatattcctcaagat
actgaaagttatacacacagaattggtcgtacaggccgtgctggtaaagaaggtatcgct
gttactttcgttaacccaattgaaatggattatattcgtcaaatcgaacaagcgaataat
cgtcaaatgaatgctttacgtccaccacaccgtaaagaagtattaaaagcgcgtgaaaac
gacattaaagaaaaagtacaaaattggatgtctaaagataatgaaccaagattacaacga
atcgctggtcaacttttagaagaatacaatgatgtagaattagttgcttcattattacaa
gaattagtagaagcaaacgatgaagttgaagtgcaacttacatttgaaaaaccattagct
agaaaaggtcgtccttcaaaaggaccacgtcgtaataacaacaataaacgtggtaacaag
tttgataataaaggtcgccgtggcaaaccagcatttaacaaaaaaggtaaaaaagataga
acatcagacagaaaagacaacaaaaagtcgatgaaaggtcgtactttcgctgaccaccaa
aaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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