KEGG   Spiroplasma kunkelii: SKUN_00128
Entry
SKUN_00128        CDS       T04056                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
skn  Spiroplasma kunkelii
Pathway
skn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:skn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SKUN_00128 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:skn03400]
    SKUN_00128 (uvrB)
DNA repair and recombination proteins [BR:skn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SKUN_00128 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SKUN_00128 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_7 P-loop_SecA AAA_30 AAA_22 Kinesin AAA_19 HerA_C TrwB_AAD_bind DUF87 nSTAND3
Other DBs
NCBI-ProteinID: ALA97052
UniProt: A0A0K2JF52
Position
116826..118790
AA seq 654 aa
MFKLTSNYLPAGDQPLAIEKLTTNLLANKKHQVLLGATGTGKTFTMANVIENYQKPTLVM
AHNKTLAMQLYVELKEMFPENRVEYFVSNFDFYQPEAYLPGKDLYINKDARQNMELDMMR
LSAFNALITSKDVIVVASVAAIYAAQDPNEYKKSFLQINRNQKISKKDLANFLVSSGYVR
NDIELIPGSFSAKGDVIKIIPGWNVKTFIRIDLFGDEIDDLAYIDGITGDVTQWLSTLTI
FPAQDYITSPERLAEAIKRIEAELKVRLAELEAAGKIVELQRLKQRTEYDLDLLRESGIC
SGIENYSRHLDLREEGEAPYTLIDFFGQDFLTIIDESHMSFPQIRAMYNTDRSRKETLVN
YGFRLKSALDNRPLNFDEFNQKLKNVIFVSATPGDYELSLVNNEVVEQIIRPTGLLDPTV
EVKSTVGQIDDIIEQVKIRRKKNERVFITTLTIRMSEDLTSYLQEQNVKVAYLHSELKTL
ERSQILLDLRKGVYDCIVGVNLIREGIDIPEVSLICILDADKQGFLRNERSLIQTIGRVA
RNAAGHVILYADSVSGSMQKAMRETARRRKIQEAYNLKYHITPATIIKNIRDYTNIKRQG
DKLHNIKNKKLKEYKTAKEGLLQDLRKEMYEASKKLDFERAAELRDIIIEIEAE
NT seq 1965 nt   +upstreamnt  +downstreamnt
gtgtttaaattaacatcaaattatttgccagcaggtgatcaacctctggcaattgaaaaa
ttaactaccaatttattagcaaataaaaaacatcaagttttattaggagcaacgggaact
ggaaaaacatttacaatggcaaatgttattgaaaattatcaaaaaccaacattggtgatg
gcacataataaaacattagcaatgcaattatatgttgagttaaaagaaatgtttccagaa
aatcgtgttgagtattttgtttcaaactttgatttttatcaaccggaagcttatttgcca
ggaaaagatttatacattaataaagatgctcgccaaaatatggagttagacatgatgcgg
ttaagtgcttttaatgctttaataactagtaaagatgttattgtcgtggcttctgttgct
gcaatttatgcagcacaagatccaaatgaatataaaaaatcttttttgcaaattaatcgt
aatcaaaaaattagtaaaaaagatttagccaattttttagtatcatcaggatatgttcgt
aatgatattgaattgattccaggtagttttagtgctaaaggtgatgtaattaaaattatt
ccagggtgaaatgttaaaacttttattcgcattgatttgtttggagatgaaattgatgat
ttagcttatattgatggaattactggtgatgttacacagtggttatcaacattaacaatt
tttccagcgcaagattatattacttctccagaacgcttagctgaagcaattaagcgaatt
gaagcagaattaaaagttcgcttagctgaattagaagcagctggaaaaattgttgaatta
caacgtttaaaacaacgaactgaatatgatttagatttacttcgtgaaagtggaatatgt
tctggaattgaaaactattcacgacatttagatttacgagaagaaggagaagcaccgtat
actttgattgatttttttggccaagattttttaactattattgatgaatcacatatgtca
tttccacaaattcgagcaatgtataacacagatcgaagtcgcaaagaaaccttagtaaat
tatggttttcgtttaaaaagtgcattagataatcgtcccttaaattttgatgaatttaat
caaaaattaaaaaatgttatttttgtttcagcaactccgggtgattatgaattaagttta
gtaaataatgaagtggttgaacaaattattcgtccaacgggattattagatccaaccgta
gaagtaaaatcaacagtaggacaaattgatgatattattgaacaagtaaaaattcgtagg
aaaaaaaatgaacgtgtttttattactactttaacaattcggatgtcagaagatttaaca
agttacttacaagaacaaaatgttaaagttgcatatttacatagtgaattaaaaacttta
gaacgtagtcaaatcttattggatttacgaaaaggagtttatgattgtattgttggtgtt
aacttaattcgtgaaggaattgatattccagaagtatcattaatttgtattcttgatgct
gataagcaaggatttttacgaaatgaacgaagtttaattcaaacaattggtcgtgttgca
aggaatgcggctgggcatgttattttatatgctgatagtgtttctggatcaatgcaaaaa
gcaatgcgagaaactgctcgccgtcggaaaattcaagaggcatataatttgaaatatcat
attactccagcaacaattattaagaatattcgtgattatactaatattaaacgtcaaggt
gataaattacataacattaaaaataaaaaattaaaagaatataaaacagctaaagaagga
ttactacaagatttacgaaaagaaatgtatgaggcaagtaaaaaacttgattttgaacga
gctgcagaattacgcgatattattattgaaattgaagcagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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