KEGG   Saccoglossus kowalevskii (acorn worm): 100368962
Entry
100368962         CDS       T04123                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46-like
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100368962
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sko03041]
    100368962
Enzymes [BR:sko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100368962
Spliceosome [BR:sko03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100368962
 Complex B
    100368962
SSDB
Motif
Pfam: DEAD Helicase_C CdAMP_rec
Other DBs
NCBI-GeneID: 100368962
NCBI-ProteinID: XP_006824047
Position
Un
AA seq 1091 aa
MPRETRHYRKRSRSSSRSSSGSPSPGRSKKRRSRSRDREKKDRYRCRSRSRERYRRSRSR
DRYERRRRSRSRERRELERERERERERRKFRRSRSRSRERKERERRRSKSRERDHRRSKS
RERDHRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERDHKRSRSRDRENKRSET
RPQERRRSRSKSKERRKSRSKSRERRQDRKSPSRIKEREHRAKTPTKNTETKIKKDKSGS
PALELEQKRLEEEMQRRRERIEKWRLERKKASQPTQPEPQKKQWSLEDESDDDEGEQQEE
EGKADKTEENGKDEDEKMETKKEEDDDVDPLDAFMQGVNDEVRQINMDDHKKRNKGSIAI
PAQGSACDWKVTVTKDFQMSTPSAWDFYVEVPEIAKMTEEDVISYRAELENVKVRGKGCP
KPIKAWVQCGVSKKVLDVLKKLKYEKPTPIQAQAIPAIMSGRNLIGIAKTGSGKTLAFLL
PMFRHIMDQDPLEADDGPLAVIMSPTRELAMQIYKECKRFCRALNVRGVCVYGGTGISEQ
IAELKRGAEIIVCTPGRMIDMLTANSGRVTNLRRCTYVVLDEADRMFDMGFEPQVMRIVD
NIRPDRQTVMFSATFPRQMEALARRILNKPLEVQVGGRSVVCSDVEQKVAIVDDDQKFLT
LLELLGVYQEQGSVLVFVEKQEGADQLLKDLMKASYSCLSLHGGIDQYDRDSAIQDFKAG
NIKLLIATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRVGRTGRAGNKGNAFTFITPEQG
RYAGDIIKAFEMADKKAPPELLQLWSEFTEKQKAEGKSIMKSSGFSGKGFKFDETEKELA
NEKKKLQKAALGLQDSDEEDAGVDIDQQIENMFASKKSVKDVTVPVGGNPALVPGAPIAG
VAPTVGVNTEKLELAKMMAERINRNLEGSKDIMQQAAQTVMKGGMLAAPAVSAKTIADQM
AEKINAKLNYRPSPENEDSNSNEPPTETFRRYEEELEINDFPQTARWKVTSKENLAQIQE
YSEAGITIRGTYFPPGKEPKEGDRKLYLAIESTSEMAVQKSKKEITRLIKEELIRLQHSY
QPTNKGRYKVL
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgccgcgtgaaacaagacattacaggaaaagatctcgatcatcatcaagaagttcgtct
ggatctcccagtccgggcagatctaagaaaagacgttccagaagtcgagacagggaaaaa
aaggacagatatcgatgcagatctagatctcgtgaaagatatcgtagatctagatcaaga
gacagatatgaaaggcggagacgatcaagatcacgagaaagacgagaattggaaagagaa
agggaacgggaacgggaaagaagaaagttcagaaggtcaaggtcaagatcaagagaacgt
aaggaacgagaacggaggcgatcgaaaagcagggaacgggatcacagacgatcaaaaagc
agagaacgagatcacaggcgatcgaaaagcaaggaacgagatcacaggcgatcgaaaagc
aaggaacgagatcacaggcgatcgaaaagcaaggaacatgttcacagacgctcaaaaagc
agagaacgggatcacaaacgatccagaagcagggaccgtgaaaataaaagatctgaaact
agaccacaggaacggaggagatcaagaagtaaatcaaaagagcgtcgcaaatctagatcc
aaaagtcgtgaaagaagacaggacaggaaaagtccttcaaggataaaagaaagagagcat
cgagcaaaaacacctacgaaaaatacagagactaaaatcaaaaaggacaaatcaggatct
ccagccttggagttagagcagaagagactagaagaagaaatgcaacgtcgacgggagcgc
atcgaaaaatggagattagagagaaagaaagcaagccaaccaacgcagcctgaaccgcaa
aaaaaacagtggagtctggaagacgagtctgatgatgatgaaggagagcagcaagaagaa
gaaggaaaggctgataaaactgaggagaatggtaaagacgaagatgaaaaaatggaaacc
aagaaagaagaagatgatgatgttgatccgctagatgcattcatgcagggagtaaatgat
gaagtccgtcagattaacatggatgaccacaaaaaacgtaacaaaggcagtattgctatc
cctgcacaaggttctgcttgtgattggaaagttactgtgaccaaggatttccaaatgagt
acaccatctgcttgggatttctacgttgaagtgcctgaaatagcgaaaatgacagaggaa
gatgtaatatcgtatcgagcagagttggaaaatgtcaaagtacgcggtaaaggatgccct
aaaccaatcaaagcatgggtgcaatgtggggtttcaaagaaagtattggatgtactcaaa
aaactcaaatatgaaaaacctactccaattcaagcccaggcaatcccagcaataatgtct
ggtaggaaccttattggaattgccaaaactggtagtggcaagacattggcatttctacta
ccgatgttcagacatattatggatcaggatcctttagaggcagatgatggacccctcgct
gtcatcatgtcacccacacgtgagttagctatgcagatctacaaagaatgcaagaggttc
tgtcgggcacttaatgttaggggtgtctgtgtgtatggtggaacaggcattagtgaacag
attgctgaattaaaacgtggtgctgagatcatcgtttgcaccccaggaagaatgattgac
atgttgacagcaaacagcggtcgtgttactaatctgcgccgctgtacgtacgtagttttg
gacgaagcggaccgaatgtttgatatgggatttgaaccacaggtgatgagaattgtggat
aatattcggccggatcgtcagactgttatgttttcggcaacgtttcctcgtcagatggag
gcattagcaagacgtattctgaacaagccccttgaagtacaagtcggtggtcgaagtgtt
gtttgttcagatgtggaacagaaagttgctattgttgatgatgatcagaagtttcttact
ttactagaacttctaggggtttaccaggaacaaggaagtgttttagtttttgtagagaag
caagaaggagctgatcagctgttgaaagatctgatgaaagcatcttactcgtgtctttca
cttcatggtggtattgatcaatatgacagggactcagccattcaagatttcaaagctggc
aatattaaattgcttatagctacgtctgttgctgccagagggttggatgtgaaacatttg
gtattggttgttaattatgattgtccaaatcactatgaagattatgtacatagagtagga
cgtacaggaagggctgggaataaaggcaatgcctttacgtttattacaccagaacaaggc
agatatgctggtgatattataaaagcatttgagatggctgataagaaggcaccaccggaa
ttgcttcaactttggagtgaatttactgagaaacagaaagctgaaggaaagtctattatg
aagagcagtggtttcagtgggaaaggattcaagtttgatgaaactgaaaaagaattggcg
aatgagaaaaagaaactccagaaagctgctttgggattacaagactcggatgaagaagat
gctggtgtagatattgatcaacaaatagaaaacatgtttgcatcaaagaagagtgttaaa
gacgtaaccgttcctgttggtggtaatccagctcttgttcctggcgcacctatcgctgga
gttgctcctactgtaggtgtgaacacagagaaactggaattagctaagatgatggcagag
cgaatcaatcgaaaccttgaaggttctaaagacatcatgcaacaagcagcacagactgtt
atgaaaggtggaatgcttgcagctcctgctgtgtctgctaaaacaatagccgatcagatg
gctgagaagatcaacgctaaattaaattaccgaccatcaccagaaaatgaagacagtaat
tcaaatgaaccaccgactgaaacattccgtagatacgaagaggagttggaaatcaatgat
tttccacagacagcacgatggaaagtcacatcaaaggaaaatcttgcacagatccaagag
tacagtgaagctggcatcacaatccgaggtacctacttccctcccggtaaagaacctaaa
gaaggtgatagaaaattgtacctggcaattgaaagtacatctgaaatggcagtacaaaaa
tcaaaaaaggaaattacaaggttaatcaaagaagaattaataagattgcaacattcatat
caaccaaccaacaaaggaagatacaaagttctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (120)   
   KEGG ORTHOLOGY (1)   
   RefGene (116)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (130)   

Download RDF
DBGET integrated database retrieval system