KEGG   Saccoglossus kowalevskii (acorn worm): 100371629
Entry
100371629         CDS       T04123                                 
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1-like
  KO
K12647  interferon-induced helicase C domain-containing protein 1 [EC:5.6.2.6]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:sko00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:sko04054]
    100371629
Pattern recognition receptors [BR:sko04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   100371629
SSDB
Motif
Pfam: DEAD RIG-I_C ResIII Helicase_C CARD_2 AAA_11 nSTAND3 ATP-synt_ab RIG-I_C-RD AAA CARD
Other DBs
NCBI-GeneID: 100371629
NCBI-ProteinID: XP_002737902
Position
Un
AA seq 1017 aa
MSSLNSTHTCRNNSLEEEPDYEDPIEIKVLRKQRGDFMHGIIPSQIVPHLTCLTRADESC
ILAATSRKGDIEGAGVLLYHLMTKKDVWYEDLLKALRNNDVKLEHLATSLENEVKKRKEE
VYDIEMTCEDSYSESYDTGNLESPPSQNCNQVYACHIITESGTKPGIKTELHVPGVPDYP
PPPYSKVEHGYDQALSVDNEGCHGDVIKQDGGNIQSKRVYESEETAKESLEKEVISPAAE
STPVGTSESQTRHVINYEVLKPRGYQEELAGPACKGLNSIICAPTGTGKTHVAMMVSKNH
MHRAMEVQAAGNSSTNAQTFVTVQNPDNKVELEKYVSIPDKFTTIAATRSPDPFQDRIAE
TMAEIEHKTGDIESEETAKESLEKEVISPAAESTPVGTSESQTRHVINYEVLKPRGYQEE
LAGPAYKGLNSIICAPVGTGKTHVAMMVSKNHMHRAMEVQAAGNSSTSKGKILLIVHMNR
LLNQTYKRFKTYLPLFKTGKISGVTTSKLTFEHLAKINDIVITTAGFFENILEKKTTSIS
AFSLIIIDECHYAMKNHSYNRIMTEYLKIKLAGCSAQLPQIVGLTACPGTGGKSQLQAAQ
THLLKLCANLDAQTFVTVQNPDNKIELEKYVSKPDKFTTIAATRSPDPFQDRIAEIMAEI
EHKTGDIETCPQRGTEEYEQFIITTRNETLNGNKHETVQCCEHLIQYNKALQISSMCRMS
DGLKIIDGFYNERWQRGQHETTSIEKYLYKLFRRNSSELFDISEDENKYPNPKVLKLKEN
LAEEIKKMDEELRGIIFVKTRALARAIYECIVDDKTLKSLKPAILVGVKSTGVECMTQAE
QDTRLRKFALGHCKLLVATSVAEEGLDIKECHMLIRYNYSTNVISLRQSSGRARALESTE
HFIGDEDLATRDSVNVFLDQQMEKAIDLIQDMPQAQLQGTVRHTQMNDIAEVYEKESKHI
PVKFKSNSVKLYCTGCGKYVCNGNDVYIYDESSHIIVDKAIIKNIATIMTTRSVMLG
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgtcttcactgaattctacgcatacttgccgtaacaacagtttagaggaggaaccggac
tatgaagacccgattgagatcaaggttcttcgaaaacaacggggcgattttatgcatggc
attataccgtcgcagattgtccctcatttgacatgtctgacccgtgctgacgaatcgtgt
atcctggctgcgacatcacggaaaggtgatatagaaggcgcgggagttctattatatcac
ctcatgacaaaaaaagatgtctggtatgaagatttgttgaaagcacttcgtaacaatgac
gtgaagctggaacacctagccacatcactcgagaacgaagtgaagaaaagaaaggaagag
gtatatgatatagaaatgacatgtgaagatagctacagtgaaagttatgacacgggaaat
ctcgagtctccgccaagccagaactgcaatcaagtatatgcttgtcatatcattacagaa
tctggaactaaacctggaatcaaaactgagttacatgttccgggtgtacctgattaccca
cccccaccttactcaaaagtcgagcacggttatgatcaagctctatctgtcgataatgaa
ggttgccatggcgatgtcatcaagcaagatggtggcaatattcagtctaaaagagtgtat
gagagtgaagaaacagcaaaagaaagtttagagaaagaggtaataagtccagctgcagaa
tctacaccagtaggtaccagtgagagtcaaacaagacatgtcataaactatgaagtccta
aaaccccgtggttaccaggaggaacttgctgggccagcctgtaagggattaaattctatt
atatgtgcacctacgggtacaggaaaaacacacgtagctatgatggtgtccaagaatcac
atgcaccgtgctatggaagtccaagcagcaggaaatagcagcaccaatgctcagactttt
gtcactgtgcaaaaccctgacaataaagtcgagctcgaaaagtacgtcagtatacccgat
aaattcactacaatcgccgccacgagatctcctgaccctttccaagacagaattgctgaa
actatggcagaaatcgaacacaagactggcgatatcgagagtgaagaaacagcaaaagaa
agtttagagaaagaggtaataagtccagctgcagaatctacaccagtaggtaccagtgag
agtcaaacaagacatgtcataaactatgaagtcctaaaaccccgtggttaccaggaggaa
cttgctgggccagcctataagggattaaattctattatatgtgcacctgtgggtacagga
aaaacacacgtagctatgatggtgtccaagaatcacatgcaccgtgctatggaagtccaa
gcagcaggaaatagcagcaccagcaagggaaagatactgttaattgtccacatgaatcgc
ctccttaaccagacatataagcgttttaagacgtacctaccattgtttaaaactggaaaa
attagtggggttactacctcgaaactaacatttgaacacttggctaagatcaacgacatt
gtcataacgacagctggtttctttgaaaacatcctagaaaagaaaactacatcaatatca
gccttttctctgataattatagatgagtgtcactatgctatgaaaaaccattcttacaac
cgcataatgacagagtatctaaaaatcaagctagctggttgttctgcccagcttccacag
attgtcggtttgacagcatgccctggaactggaggtaaaagtcaactccaggctgcacaa
acacatttattgaaactatgtgcaaacttagatgctcagactttcgtcactgtgcaaaat
cctgacaataaaatcgagctcgaaaagtacgtcagtaaacccgataaattcactacaatc
gccgccacgagatctcctgaccctttccaagacagaattgctgaaattatggcagaaatc
gaacacaagactggcgatatcgaaacatgcccacaacgaggcacagaggaatatgaacaa
ttcatcatcacaacgaggaatgaaacattaaatgggaataaacatgagactgtacagtgt
tgtgaacacctgattcaatacaataaagctctgcaaataagtagcatgtgtcgcatgagt
gatgggttaaagataatagacggcttctacaatgaacgatggcagcggggtcagcacgag
accacttctattgagaagtatctgtacaaactattcagacgtaattccagtgagctgttt
gacattagtgaagatgaaaacaaatatccgaatcccaaagttttgaaattgaaagaaaat
cttgctgaagaaattaaaaaaatggacgaagaactcagaggaattatttttgtgaaaaca
agggctttggcacgagcaatatacgagtgtattgtcgacgataaaacactgaaatcactg
aaacccgctatcttggttggagttaaatcgacgggtgtggagtgtatgacgcaagctgag
caagatacccgtctgcgaaagtttgcacttggacattgcaagctgttggtggcaacaagt
gttgccgaagaagggttagacatcaaagagtgccatatgttaatcagatacaactattca
accaatgtgatatcactgaggcagtcaagtggtcgagcacgtgcgctggagagcacagaa
catttcattggagatgaagatcttgctacgcgagatagtgtaaatgtttttctcgaccag
caaatggaaaaagcgatagacttgattcaagatatgccgcaggcgcaactgcaaggcact
gtgcgacatacacaaatgaatgacattgctgaagtttatgaaaaagaatcgaaacacatt
cctgtcaaattcaagtcaaattctgtcaaattgtattgcactgggtgtggcaaatatgta
tgtaacggaaatgacgtatatatttatgatgagagctcccatataattgtagataaggcc
attattaaaaacatcgccaccataatgaccacaagaagcgtgatgctgggataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (40)   

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