KEGG   Saccoglossus kowalevskii (acorn worm): 100373327
Entry
100373327         CDS       T04123                                 
Name
(RefSeq) poly [ADP-ribose] polymerase 4-like
  KO
K10798  poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100373327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sko03032]
    100373327
   03036 Chromosome and associated proteins [BR:sko03036]
    100373327
   03400 DNA repair and recombination proteins [BR:sko03400]
    100373327
Enzymes [BR:sko01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     100373327
DNA replication proteins [BR:sko03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    100373327
Chromosome and associated proteins [BR:sko03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    100373327
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100373327
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 BRCT BRCT_2 PARP_reg VWA PTCB-BRCT VWA_CoxE VWA_2 14-3-3 RTT107_BRCT_5 BRCT_3 LIG3_BRCT
Other DBs
NCBI-GeneID: 100373327
NCBI-ProteinID: XP_006818703
Position
Un
AA seq 1310 aa
MGIFTKCQITLELGTSIQFKKKQEIKKKITENDGIISYIITKKTTHLVVSNPEKADTSYK
MRQAIKYDIPVVSMDFIYQCVEKQKLLDPDQYIVYGTSRTGEFSSGKIVDRYEVAKSAVL
CSQRKDHENGQTNFCVLEIHIVPIDDINDDKSGDSSYKYRVFTHSGILDEMKNEDCGSKE
CRYFESSDEALDCYTHLYEQQESKPHNLRKTQKMISRNIGSRKFRKVMLEMQEGWSLSSG
VSALVEHVWEEATGQLEDILSVSVESLKTENVEKAEALLLQLKRALDNVLSDSEIMELSK
EFYSFIPHKEDFKVINSKSVIAKKQELCQLIRDIVSVSEATDWSTRSDVEAKYKALRCHI
EHLENEDDSEYKNIKDLVISSQICDTKIKIENIYAVVRSIEESFFTQNTGNVRLLFHASK
PVNFVGILSRGLLLPRVVVDDFGGTRTDPGMLGHGIYFADSSSTSAKYSLPSTKSGCRFM
LVNEVALGRCKEFNQYCKNLTAAPDGFDSVHGVRGTKQQSSDFKDDEYVVYNTNQQRIRY
LVEFTLPSDTVKSLSSRSVTFGVTDDSSSESSIELNDVHCISDPMSKVKPGLVSTSDSPV
PLKSVNVRARIMDLVAQVIVLQAYTNENSVAIEAKYVFPLDTMAAVVGFEAFINGKHIIG
EVKEKETAHREYKEAISEGHGAYLMDEETPDVFTVSVGNLPPKASVLIKITYVTELSVDG
EKILFFLPGSVAPWTKDTALSQEIQKDVKTVKVDKVGHGSVSVQASIEMPFDIRNLESPT
HEINIKRTATKAVVELVKDSVLGDSFQLLIGLAEIHVPRMWVEKHPDKQDSQACMLTFYP
EFEADSVADCEVIFLVDLSNSMKSCSLEAQKVIMLCVLNLPDTYRFNIVVFGTAYDELFP
SSRLKSKSTLRAAKDFAARCFANMGNTEAWRPLHSFYCLRPSQGVRNVFLISDGHINNQE
STIEDVRKNCQHTRVFTFGVSCTANHHILQSMARVGAGAYEYFDSKTKSKWERKVKSQIS
KAAQPVLTSVNVEWQQFDSNSPIPVQAPSHIVSLFSGSRQVVYGFVPHCTQATLKAEIDD
HFVSTMVSTADLNITEGKILHQLTARAIIRDWEDGTLDIDRTEHEVKKTEQKDYIINISK
EFSIVTQFTSFVAIEKREKEEDLSPQGPSIEELVAKEDVDILMYVGWEEGKKDKEIKLSG
EEQIKQLLDGAKKDETLSNILKAERSYQQAYEVATKELSASHPLRILCDVLIVGLTVDLV
CLECDILVVGLTVDLVCLECDVLVVGLTMDLVCLECKLALPKTPLNADRK
NT seq 3933 nt   +upstreamnt  +downstreamnt
atggggatatttaccaagtgtcagattacacttgaacttggtacaagtatacagtttaaa
aagaaacaagaaataaagaagaaaattacagaaaatgatggtattatctcttatatcatc
actaaaaagactacccaccttgtcgtgagtaacccagagaaggctgacacatcatacaaa
atgagacaagccataaagtatgacattcctgtcgtatccatggattttatttaccagtgt
gtggagaaacaaaaactacttgatcctgatcaatacatcgtctatggaacttcccggact
ggggaattcagttctggaaaaattgttgaccgatatgaagttgctaaaagtgcagttttg
tgcagtcagagaaaggaccacgaaaatggacagactaatttctgcgttcttgaaatacac
attgttccaattgatgatattaatgatgataagtcaggtgacagttcctataaatataga
gtgtttactcattctggaattttagatgaaatgaagaatgaagactgtggttcaaaggaa
tgccgttattttgaaagcagtgatgaagctttggattgctacacacatctgtatgaacaa
caagaaagtaaaccacataatttgaggaaaacacagaaaatgatttccagaaatattggg
tctcggaaatttcgaaaggtaatgttagagatgcaggagggttggtcgttgtcatcaggt
gttagcgctttagtagaacacgtctgggaagaagctacaggacagttagaagatattctc
tcagtcagtgtggaaagtctgaaaacagaaaacgtcgaaaaagctgaagctcttctactg
cagttgaaaagagctttagataatgttttaagtgattctgagataatggagttatccaag
gagttttatagtttcattccacataaagaagactttaaagtgattaattcaaaaagtgtt
attgcaaagaaacaagaactttgtcagctgatcagagacattgtaagtgtgagtgaagcc
actgattggtcaactcgtagtgacgttgaagccaagtacaaggcattacgatgtcatatt
gaacacctagaaaatgaagatgattctgaatataaaaacatcaaagatttagtgatatct
agtcaaatctgtgatacaaagataaagattgagaacatctatgccgtagtcagatctatt
gaagaaagtttttttacacaaaacactggtaatgttaggctgttatttcatgcctctaaa
cctgttaattttgtgggtattttatcaaggggattgttgttacccagagttgtagttgat
gactttggaggaactcgtaccgatcctggaatgctcggtcatggaatctattttgctgat
tcatcaagtacaagtgctaaatacagtttaccaagcactaaaagtggatgtagattcatg
cttgtaaatgaagtagctcttggcagatgtaaggaatttaatcagtattgtaaaaacctg
acagcagctcctgatggatttgatagtgtacacggagtgagaggaacaaaacaacaatca
tcagattttaaggatgatgaatatgtggtatacaacacgaatcaacaaaggatccgctat
ctggttgagttcactcttcccagcgacactgtgaaatcattatctagcagatcagttact
tttggagtaactgatgactcctcatcagaatcctcaattgaattgaatgatgtacattgc
atttctgatccaatgagcaaagtgaaaccaggtttggtatcaacgagtgacagcccagta
cctttgaaatctgtcaatgttagggcacgaattatggaccttgtagcgcaggttatagta
ttacaggcttacaccaatgaaaacagtgtagctatagaggccaagtatgtgtttccatta
gacaccatggctgctgtggtagggtttgaagcatttatcaatggtaaacatatcatagga
gaagtcaaggagaaagagacggcacacagagaatacaaagaagccattagtgaaggacat
ggggcatatttgatggatgaggaaacacctgatgtattcacagtcagtgtgggtaatcta
ccacctaaggctagtgtacttattaaaataacctacgtcacagagttgtcagtggatggc
gaaaagatcttgttttttcttcctggtagtgttgcaccatggaccaaagacactgcattg
tctcaagaaatacagaaagatgtcaagactgttaaagttgataaagttggtcatggtagt
gtgagtgtacaagcttcaattgagatgccttttgatatcaggaatctggaatctcctaca
catgaaatcaacatcaagcgtactgcaactaaagctgtggtggaattagtgaaggattct
gtacttggtgatagtttccagttgctgattggtttagcagagatacatgtaccaagaatg
tgggtggaaaaacatccagataaacaagatagtcaggcatgcatgttgacattctatcca
gagtttgaggctgatagtgtagctgactgtgaagtgatatttctagtagatttatctaac
tcaatgaaaagttgtagtttagaagcccagaaagtcattatgttgtgtgttctgaattta
ccggacacttatagatttaatattgtggtatttggaacagcatatgatgagttatttcca
agcagtcgtcttaaaagcaagtcaacattgagagctgctaaagattttgcagctagatgt
tttgccaatatgggcaatacagaagcatggagaccattacattcattctattgcctcaga
ccttctcaaggtgtaaggaacgtcttcttgatatcagatggacatattaataaccaggaa
tccaccattgaggatgttcgaaagaactgtcagcacaccagagttttcacatttggtgtc
agttgcactgctaatcaccatattctgcagtcaatggctagagttggtgctggtgcctat
gagtattttgacagtaaaaccaaatctaaatgggagagaaaggtcaagtcacagatttcc
aaagctgcacagccagttctgacctcagtcaatgtggaatggcagcagtttgattcaaat
tcaccaataccagtacaggcacccagtcatattgtgtcattattcagtggttccagacaa
gtagtatatgggtttgtaccgcactgcacacaggcaacactgaaagctgaaatagatgac
cactttgtgtcaacaatggtctctactgcagatctcaatatcactgagggcaagattctt
caccagttgactgcacgtgccatcattagagactgggaagatgggacattggacatagat
cggactgagcatgaggtgaagaaaactgaacagaaagattacattatcaacattagtaaa
gagttctctattgtcacacagtttacaagttttgtggccattgaaaagagagaaaaggag
gaagatctcagcccacaaggtcccagcattgaagaattggttgctaaggaggatgttgac
atccttatgtatgtaggatgggaagaagggaagaaagataaagaaattaagctgagtgga
gaagaacagataaaacagttattggatggtgcaaaaaaagatgaaactctgtctaacatt
ctgaaagctgagaggagttaccagcaagcatacgaagtagcaactaaagagttatctgca
tctcatccactgagaatcttgtgtgacgtactgatagtgggtctcacagtggacttggtg
tgcttggagtgtgacatactggtagttggtctcacagtggacttggtgtgcttggagtgt
gacgtactggtagtgggtctcacaatggacttggtgtgcttggagtgtaagctggcacta
cctaaaacacctctaaatgcagacaggaaatag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (64)   

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