KEGG   Saccoglossus kowalevskii (acorn worm): 100376610
Entry
100376610         CDS       T04123                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17-like
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:sko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sko03041]
    100376610
Enzymes [BR:sko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100376610
Spliceosome [BR:sko03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    100376610
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-GeneID: 100376610
NCBI-ProteinID: XP_002731189
Position
Un
AA seq 670 aa
MSRFDRDRSYDSSSRSDRRGFGPPGRGGRGGGSSHQFGSGFNGPPRFGGRGGGGMGGKSN
SQPGEKLRKIKWDLESLPRFEKNFYREHPDVARREQHELEAFQNEKQITTKGRGVPKPVF
HFGECSFPDYILATVKRNNFKEPTAIQAQGWPMALTGRDVVGIAQTGSGKTIAYMLPAIV
HINHQPFLDRGDGPICLVLCPTRELAQQVAHVAVDFGKSSRIKNTCVYGGAPKGSQIRDL
ERGVEICIATPGRLLDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ
VLMWSATWPKEVRGLAEDFLKDYLQVNIGALSLSANHNILQIVDVCQEHEKDDKLIRLLE
EIMQENENKTLIFVETKKRTDDLTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRAGNAPI
LLATDVASRGLDVTDIKFVINFDYPSSTEDYIHRIGRTARSERTGTAYTFFTAGNMKQAP
ELIDVLREANQVINPKLINMAEAARKSFGGRGGRSRYRTSGSFGGGSRDKPGFKQGFKSY
GSQGGSRGGGYGGSDRQGGSKSYGQGGQSSRAPYNRGGQKHGGYGQSYGQNGSSQSSYGS
GGSSSQQSAPTPLLGQMNGYNSSSASAPSSTSQSSNTQSQQYGNIQQQYQAYAMQYAAYQ
QQQQSQQPAQ
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtctcgttttgaccgtgaccgatcctacgattcttccagtcggtctgacaggagagga
tttggtcctcctggtagaggcggaagaggtggtggcagcagtcatcagtttggtagtgga
tttaatggtccaccacgatttggtggtcgtggaggaggtggcatgggtggtaagagcaat
agccagcctggggagaaactgagaaaaatcaagtgggatttggaaagtttgcctcgtttc
gagaagaatttttacagagaacaccctgatgttgccagaagagaacaacatgaacttgaa
gcattccagaatgaaaaacagataacaacaaaaggacgaggtgttccaaaaccagtattc
cattttggggaatgttctttcccagactatatcctggctactgtcaaaagaaataatttc
aaagagccaacagcaattcaagctcaaggttggcccatggctttgactggacgagatgtg
gttggtattgctcagactggatctggcaagactatagcttacatgttgccagctattgtt
catatcaaccaccagccattcttggaccgtggagatggaccaatttgtttggtgttatgt
ccaacaagagaattggctcagcaagtagcccatgttgctgttgattttgggaaatcttcc
agaataaagaatacttgtgtttatggtggagctccaaaaggatcccagattagagatctt
gagagaggagttgaaatttgtattgccactcctggtagattactcgacttcttggaggca
ggaaagacaaacttgaggaggtgcacatacttggtacttgatgaggccgacagaatgttg
gacatgggttttgaacctcaaatcagaaaaattattgagcagattagacccgacagacag
gtactaatgtggagtgccacttggccaaaagaagtaagaggactggcagaagactttcta
aaagattatcttcaagtaaatattggtgcattatccttgtccgccaatcacaatattctg
cagattgttgatgtttgtcaagagcacgagaaagatgacaagctaataagactgttagaa
gaaatcatgcaagagaatgagaacaaaacgctgatctttgttgagaccaaaaaaagaaca
gatgacttaactcgaagaatgagaagagatgggtggcctgctatgtgtattcatggtgac
aaatcgcagcctgaacgagactgggttctcagtgaattcagagcaggaaatgctcctatt
cttctagctacagacgttgcatcacgtggcttagatgtgacagacatcaaatttgtgata
aactttgattatccaagttcaactgaggactatattcatcgtattggacgtactgctcga
agtgagcgtacaggtactgcatatacattcttcactgctggcaatatgaagcaagccccc
gagttgattgatgtcctacgagaggctaaccaagtgattaatccaaagttgatcaatatg
gccgaggcggccagaaagtcatttggtggcagaggtggtcgtagtcgctacaggacatct
ggttcttttggaggtggtagtcgcgataaaccagggttcaagcaaggattcaagtcttat
gggagccaaggggggtctagaggtgggggttacggggggtcggatcgccagggtggttca
aagagttatgggcaggggggacaatccagtagggcaccatacaacagaggtggtcagaag
catggagggtatggtcaaagttatggacagaatggtagttctcaaagcagttatgggtct
gggggatcaagttcacaacagagtgctccaactccattgcttggtcaaatgaatggttat
aattccagcagtgcatctgctccatcctctacttctcagtcgtctaatacgcagtcacaa
cagtatggtaatatccagcaacagtaccaagcatatgccatgcagtacgccgcttatcaa
cagcaacagcaatctcaacaacctgcgcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (71)   

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