KEGG   Sphingomonas koreensis: BRX40_07510
Entry
BRX40_07510       CDS       T04828                                 
Name
(GenBank) polynucleotide adenylyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
skr  Sphingomonas koreensis
Pathway
skr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:skr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRX40_07510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:skr03019]
    BRX40_07510
Enzymes [BR:skr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     BRX40_07510
Messenger RNA biogenesis [BR:skr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BRX40_07510
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: APR54881
UniProt: A0A1L6JG11
Position
complement(1533765..1534958)
AA seq 397 aa
MILPGASWRNQPGLDRLAATLGPGNARFVGGAVRDTLLGLPVTDVDVATPLAPEQVVDLL
EGAGIKAIPTGIAHGTITAVSSGTVVEVTTLRRDVSTDGRRATVAFTDDWREDAARRDFT
INALYADPQTGEIFDYFGGLADLGKRHIRFIGDPLQRIAEDHLRILRFFRFLARFGDTPD
QDALEACTARANDLMALSRERIRDELLKLLVAPDAVRVLRLMVERDILKPVVPEIDPAGV
ERLATLSGHEATAGLAPDPVRRLAAVLPLDPSVNEAVGARLKLSNAERQALASAIRSEFA
EGPQALAYRIGPDRAADRLLLAGDAAGARDVAGWTPPRLPLSGGTLIGRGLSKGPDVARA
LRRVEDIWIAEGFPGEDRTGQIADSVVAELLSRDSSA
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgatccttcccggcgcctcctggcgaaaccagcccgggctcgaccggctcgccgcgacg
cttggccccggcaatgcccgcttcgtcggcggggcggtgcgcgacacgctgctcggcctg
ccggtcaccgatgtcgacgtggcgacgccgcttgcgcccgaacaggtcgtcgatctgctc
gaaggcgcggggatcaaggcgatccccaccggcatcgcgcacggcacgatcaccgcggtg
agcagcgggacggtggtcgaggtgacgacgctgcgccgcgacgtctcgaccgacggccgc
cgcgccaccgtcgccttcaccgacgactggcgcgaggacgcggcgcggcgcgatttcacg
atcaacgcgctctatgccgatccgcagacaggcgagatcttcgactatttcggcggcctc
gccgatctcgggaaacggcatatccgcttcatcggcgatccgttgcagcgcatcgccgag
gatcatctgcgcattctgcgcttcttccggttcctcgcccggttcggcgacacgccggat
caggacgcgctcgaagcctgcaccgcccgcgccaacgatctgatggcgctctcgcgcgag
cggatccgcgacgaactgctcaagctgctcgtcgcgcccgatgcggtccgcgtgctccgg
ctgatggtcgaacgcgacattctgaaacccgtggtgcccgagattgatccagccggggtc
gaacggctcgccacgctctccggacacgaagcgacggctggtctggcgcccgatccggtc
cgccgcctcgcggcggtcctcccgctcgatccttccgtgaacgaggcggtcggtgcgcgt
ctcaagctctccaatgccgaacgccaggcgctcgcaagcgcgatccgctccgagttcgcc
gaagggccgcaggcgctcgcctatcgtattggacctgatcgcgccgccgaccggctgctg
ctcgccggcgacgccgcgggagcacgcgacgtcgcgggctggacgccgccccgcctgccg
ctgagcggcggcacgctgatcgggcgcggcctgtcaaagggcccggacgtcgcccgagcg
ctgcgccgggtcgaggatatctggattgccgagggatttcccggcgaggaccgcaccggt
cagatcgccgattcggtggtcgccgaactgctgtcgcgcgacagcagcgcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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