KEGG   Salinivibrio kushneri: FCN78_03055
Entry
FCN78_03055       CDS       T05956                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
sks  Salinivibrio kushneri
Pathway
sks03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sks00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FCN78_03055 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sks03400]
    FCN78_03055 (recB)
Enzymes [BR:sks01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FCN78_03055 (recB)
DNA repair and recombination proteins [BR:sks03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FCN78_03055 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_25 AAA_11 SLFN-g3_helicase ResIII AAA_30 CATASP
Other DBs
NCBI-ProteinID: QCP01463
Position
1:633147..636734
AA seq 1195 aa
MEPQILNPLTLPLDGVRLIEASAGTGKTFTIAGLYLRLLLGHGRAAPCRVEQILVVTFTE
AATQELKDRIRRRIHEARFAFMRGESDDPIIGPLLAEICDHKTAAQRLLEAERQIDEAAI
YTIHGFCQRMLTQNAFESGSLFSHEFVTDERQIKARAAADFWRRRFYPLPKSLAGVVSSY
WPAPEALLKEIAPYLSGPAVTVKAPDLGEDLMAAHQAAIAKIDAVKRAWREAGEQINEQL
SAAKLDGRSYRKDHLANWLNAMEQWANAETLDYQLPDKLEKFAQQTLAAKSKAEPPSLAL
FDQIQALVDQPPTLKPGLTALAIKEVRQLLRQEKRRQGWLSFDDLLSQLASALDQDSQDQ
LAARIRSLYPVAMIDEFQDTDPLQYQIFSTVYQPPVADDAPVFADAETEEEGERTGLMII
GDPKQAIYAFRGADIFTYIHARAQVSDHYNLATNWRSTDGMVRGVNALFSRAKAPFVYQD
SIPFLAVASSPSAKQKALVVEGNEQPALTFWHHSPDELCAKQDFEQTLAVSTAQHITQVL
NQSVVGNSYLQTPSGQAEIQPHNIAVLVRTGREAQLVKQALAEKGVASVYLSNRDNVFAS
PVASDIERILVAVMQPENERKLRAALASPLFGLTAEQLALLNQDEALWEQEVVAFSHYRD
TWQRRGVMPMLRQVASARQVAENWLAMPQGERCVTDFLHIAELLQSASQQLDNPHALIRW
LQERMAEPAQQSEEQQVRLESERDLVQIVTIHKSKGLEYDLVYLPFACQYRESSQPFYHD
EQYQPVLALDNVDEGKERAEKERLAEDIRLLYVAVTRAVYGCFIGCAPLKQGNSRQKDSA
LHLTALGYLLQHGEAGDAGLLAESLAGLANASDAVAVVAPPEPDDSLYTPQTGAHEALSA
RQFDGKIDRQWRLTSYSGLLKQSHHVSALPTLASYDLDADDDLADEETPDVAVDPWSVFA
FPKGARAGTFLHTLFEEVDFTADLMSEEVAELITHHLSLENYDPQWCPILQQWMTQVLKH
PLNDQGLRLNHIDNASRLTEMEFVMPLAALDCQRLNRLAARYDALSARAGQLTFDTARGM
LKGFIDLTFRADGKYYVLDWKSNHLGDSVDDYHPEALKEAMIAHRYDFQYQIYTLALHRF
LRQRIPDYDYDTHVGGVFYFFLRGASDSGETGVFAHRPDKALIDALDNLFAGESV
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggaaccgcagatcctcaacccgctcaccttgccacttgatggcgtccgattaatcgaa
gcctccgccggcaccggtaagacgtttaccattgctggcttgtacctgcgattgttgctt
gggcatggccgcgcagcgccgtgtcgggtcgagcaaatactggtggtgacgtttaccgaa
gcggcaacccaagagctaaaagaccgtattcgacgtcgcattcatgaggcgcgttttgct
tttatgcgcggggagagtgacgatcctatcattggccctttgctggcagagatttgcgat
cataaaaccgcggcgcagcgactgttagaggccgaacgtcagatcgacgaggcggccatc
tataccattcacggtttttgtcagcggatgctgacccaaaatgcgtttgagtcgggcagc
ctgttcagtcatgaatttgtcaccgacgagcgacagatcaaagcgcgtgcggcggccgac
ttttggcgtcgccgtttttatccgctgcctaaatcgttagccggtgtggtgagcagctac
tggcccgcaccggaggccttattaaaagagattgcgccctatttatccgggccggctgtc
acggtcaaggcgcctgatctcggcgaagatctcatggcggcacaccaagcggcgattgcc
aagattgatgcggtgaagcgcgcatggcgcgaggcgggggagcagatcaacgaacaactc
agcgccgctaaactcgatggccgcagctatcgcaaagatcatttggcgaactggctgaat
gcgatggaacaatgggccaatgccgagacgcttgattaccagttgcccgacaaattggaa
aaattcgcccaacagacgttggcggccaagagtaaagctgagccaccgagcctagcgcta
tttgatcaaattcaggcattggttgatcagccgccgacgttaaaaccgggattgaccgca
ctggcgattaaagaagtgcggcagctgctccgccaagaaaaacgtcgccaagggtggctc
tcgtttgacgatctcctttctcaacttgccagcgcacttgaccaagatagccaagaccag
ttggcggcacgtattcgcagcttatatccggtggcaatgattgatgaattccaagatacc
gacccgctgcaatatcagatttttagcactgtctatcagccaccagtggcggacgatgcc
cctgtattcgcagacgcagagacagaggaagagggtgagcgcaccggcttaatgataatt
ggcgatcctaagcaggcaatttatgcctttcgtggcgccgatatcttcacctatattcat
gcccgtgcacaggtgagtgatcactataaccttgccaccaactggcgctcgacagatggc
atggtgcgcggagtcaatgccttgttctcacgtgcgaaggcaccgtttgtttatcaagac
agtattccctttttagcggtggcctcgtcgcctagcgccaaacaaaaggcgctggtggtg
gagggaaacgagcagcccgcgctcaccttttggcatcacagcccggatgaattgtgtgcc
aagcaagattttgaacagaccttagcggtgagtaccgcacagcatatcacgcaagtgctc
aaccaatcggtggtgggcaatagttatctacagacgccttccggccaagccgaaattcag
ccgcacaatatcgccgtgttggtgcgcaccggacgcgaggcacagctggtcaagcaagcg
ctggccgaaaaaggcgtggcgtctgtgtatctttctaaccgtgataatgtgttcgccagc
cctgtcgccagcgatattgagcgcatcttggtggcggtgatgcagcctgaaaacgagcgt
aagttgcgggcagcgctagccagccccttatttggcctgactgccgagcagctggcgcta
cttaatcaagacgaagccttgtgggagcaagaggtggtggcctttagccattaccgtgat
acttggcagcgccgtggggtgatgccgatgcttcgccaagtcgccagtgcccgccaagtg
gcagaaaactggttggcgatgccgcaaggcgagcgctgtgtgaccgattttttgcatatt
gcggagttgctgcaaagtgccagccagcaattggataacccccacgcgctgatccgctgg
ttacaagagcggatggccgagccggctcaacaatcggaagagcagcaggtacggttggag
tcggagcgtgatttggtgcaaatcgtcaccatccacaaatcgaaaggcttggaatacgat
ctggtttacttgccgtttgcttgtcagtatcgcgaaagcagccaacctttttatcatgat
gaacagtatcagccggtgctggcgctggataatgtcgatgaaggcaaagagcgcgctgaa
aaagagcggctggctgaagatatccgcttgctgtatgtggcggtgacccgtgccgtgtat
gggtgttttatcggctgtgcacctcttaaacaaggtaacagtcggcaaaaagactcggcc
ttgcacttaacggccctcggctatttgcttcagcatggagaggccggtgatgctggcctg
ctggccgagagtttggctggattggcgaacgcgagcgatgcggtggctgtggttgcgcca
ccggagccggacgatagtctttatacccctcaaacgggggcgcacgaggcgctaagcgcg
cgtcagtttgacgggaagattgaccgtcagtggcgcttaaccagttactcagggctgtta
aaacagagccatcatgtcagcgccttgcccacattagccagttacgacttggacgcggac
gatgatctcgctgacgaggagacgccggatgtagcggtggatccttggtcagtttttgcg
tttcccaaaggcgcacgagccggtacctttttacataccttatttgaagaggtggacttt
accgcggatttgatgagtgaagaagtcgctgagcttattacccatcaccttagcttggag
aactatgacccgcagtggtgcccgatattacagcagtggatgacacaggtattgaaacac
ccgcttaatgaccaagggctgaggctgaaccatattgataacgccagtcgattaacggag
atggagttcgtgatgcctttggccgcactcgactgccagcgactcaatcgactcgccgcg
cgatatgatgcgttatcggcgcgtgctggccagctcacctttgacacggcgcgcgggatg
ttaaaaggctttatcgatttaaccttccgcgccgacggcaagtattacgtgctggattgg
aagtcgaaccatttaggggacagtgtggacgattatcatcctgaggcgctcaaagaggcg
atgatcgcgcaccgatacgactttcagtaccagatctataccttggcgctgcaccgcttt
ttgcgccagcggatcccagattatgattacgacacccatgtggggggtgtgttttatttc
tttttacggggcgccagtgatagcggcgagaccggtgtgttcgcgcaccgtcccgataag
gcgctgattgacgccttggacaacctctttgctggagagtcggtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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