KEGG   Serpula lacrymans: SERLADRAFT_372905
Entry
SERLADRAFT_372905 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
sla  Serpula lacrymans
Pathway
sla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SERLADRAFT_372905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sla03019]
    SERLADRAFT_372905
Enzymes [BR:sla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     SERLADRAFT_372905
Messenger RNA biogenesis [BR:sla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     SERLADRAFT_372905
SSDB
Motif
Pfam: CLP1_N CLP1_P Clp1 SRPRB AAA_16
Other DBs
NCBI-GeneID: 18810454
NCBI-ProteinID: XP_007322059
JGI: 372905
UniProt: F8P6N6
Position
Unknown
AA seq 488 aa
MHSNALHNTKEWVLEPETEYRFELDPGTSLAIKLLDGQAEIFGAELVEGIAYLFGFECKA
AIYTWQGCTLEISNASTEYISEETPMSAYANVHIAFEQMRVRALRALHGSPASDDDPSAN
ADPPRVLVLGPENSGKTSVCKILTNYAVRAGQNWSPLLVSVDPSEGGWSAPGAISAAPVS
SPIPTASPANPLGSAATSAPTALPSNALLPLVYWYGHADIKRNPTLLDRVIRNLGENIGE
RFYNDVEGRTSGLIIDTPSSFSSSANTGTSTENRHTLIKACVDAFRINVILIVGHEKLNV
EMQRLYGSRLAVVKIPKSGGVVELDHSYRERVQKHQLHTYMYGQVIDPPPGIPSGMVDGE
MTADLVLSPSSTVLSFDDLTIYRVGQETMAPSSALPIGAARTVSEMQPILVDPSSPSSGL
LNAVLALLAPPNPDESERYDEEILDLHVIGFLIITSLDIPNRKMTILSPTQGSLTGRTAV
VGSFEWQE
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgcattctaatgctttgcacaatacaaaggagtgggtcctagaacccgagacagagtac
agattcgaactcgatcccggaacatctctagccatcaagctcttggatggacaggcagaa
atatttggcgctgaactcgtagaaggcatcgcctacctttttggtttcgagtgtaaagcg
gccatatacacatggcaaggatgcacgctagagataagcaatgcctccaccgagtatatc
tcagaggagacgcccatgtcggcctacgcaaatgtccacatcgcattcgagcagatgcgc
gtccgtgcactccgcgctctccacggatcccccgcttccgacgacgaccccagcgccaac
gcagaccctccccgagtcctcgtcctaggcccagaaaactctggaaaaacaagcgtatgc
aagatcctaaccaactacgcagtccgcgcaggccagaactggtcgcccttacttgtcagc
gtcgacccaagcgagggaggctggtcagctccaggcgccatctcagccgctcccgtctca
agccccatcccgactgcctcacccgcaaaccccctaggctcagcagccacttcagctccc
accgcactcccctccaacgctctcctccctctcgtctactggtacggtcacgccgatatc
aagagaaatccaacgctcctagaccgtgtcatccgcaaccttggagaaaatatcggcgaa
aggttttataatgacgtcgaaggacgcacatctggcctcatcatcgatacaccttcatcc
ttcagctcaagcgcaaacacgggaaccagcacagagaaccgacatactcttatcaaagcc
tgtgtagacgcattcagaatcaacgtcatcctcatcgtcggccacgaaaaactcaacgtc
gaaatgcaacggctttacgggagccgtctcgcagtagttaaaatcccaaaatcaggaggc
gtcgtcgaactagaccacagctaccgcgaacgcgtgcaaaagcaccagctccacacctac
atgtacggccaagtcatcgacccccctccagggatcccatcaggcatggtagacggcgaa
atgaccgccgacctcgtcctctctccctcctcaaccgtcctcagcttcgacgacctcacg
atctaccgcgtcggccaagaaacgatggctccctcttcggccctccccatcggtgcagcg
cgtacagtctcagagatgcaacccatcctcgtcgacccatcctcacccagctcaggtctg
ctcaacgcagtcctcgccctcctcgcccctcccaaccccgacgaatccgagcgctacgac
gaagaaatcctagacctgcatgtcatcgggttccttatcattacgagccttgacatccct
aatcgcaagatgacgatcctctcaccgacacaagggtcgctgacagggcggacggccgtc
gtcgggtctttcgagtggcaggagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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