KEGG   Serpula lacrymans: SERLADRAFT_439821
Entry
SERLADRAFT_439821 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
sla  Serpula lacrymans
Pathway
sla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SERLADRAFT_439821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sla03041]
    SERLADRAFT_439821
   03009 Ribosome biogenesis [BR:sla03009]
    SERLADRAFT_439821
Enzymes [BR:sla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     SERLADRAFT_439821
Spliceosome [BR:sla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    SERLADRAFT_439821
 Complex B
    SERLADRAFT_439821
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    SERLADRAFT_439821
Ribosome biogenesis [BR:sla03009]
 Eukaryotic type
  90S particles
   Helicases
    SERLADRAFT_439821
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N DEAD Helicase_C AAA_22 SRP54 AAA_19 AAA_23 T2SSE ABC_tran Flavi_DEAD nSTAND3 AAA_30 RsgA_GTPase
Other DBs
NCBI-GeneID: 18815260
NCBI-ProteinID: XP_007320309
JGI: 439821
UniProt: F8P1P0
Position
Unknown
AA seq 766 aa
MSNSVKENSYLAHSIPNERRHNMPPTNGSASAKEPLLGFLPRKVTGPQVRKALDHDINAF
TKLPHTPQYRKILEARKKLPVRWSVGDTNASHEIIQFTSNQIIVMVGETGSGKTTQIPQF
VAYTDLPHTKGKLVACTQPRRVAAMSVAKRVADEMDVELGRQVGYSIRFEDMTEPGTTFL
KYMTDGMLLREAMNDPSLDRYSTIILDEAHERTLATDILMGLLKDLAKRRSDLKIIIMSA
TLDALKFQKYFGLTSDTAAPLFKVPGRTHPVEVFYTQEPEPDYVEAAIRTVLMIHRAEDP
GDVLLFLTGEEEIEDACRKIKLEADDLVNQDPDSVGPLICIPLYSSLPPQQQQRIFDPPP
SARSPDGPPGRKIVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKA
SAQQRAGRAGRTRPGKCFRLYTEKDFMSELEEQTHPEILRSNLANTVLELVKLGIKDLVK
FDYVDAPAPETLMRALELLNYLAALDDDGNLTPLGTIMAEFPLDPQLAKMLIVSPEFKCS
NEILTITAMLSVPNVWLRPNNQRKEADAAKALLTVPDGDHLTMLNVYNNYIQNKYDKNWA
WTNYLSARALAQAENVRDQLKRTMERFEVELVSIVDPNKLYLAVRQALVCGFFMQVAHKE
GDKGNYLTVKDNQVVGLHPSCGLDAQPDWVIFNEFVLTTRPYIRTVTDVRPEWLLEFASV
YFDLSSFPDGETKRALQRVANKRAGKSGRVGDDGDGAKKKKLKKSK
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtcaaatagtgtcaaagagaactcctacctggcccactcgatccccaatgagcgccga
cacaatatgcccccaaccaatgggtcagcaagtgcgaaagaacctctgctcggcttttta
ccaagaaaagtgactggaccacaagtccggaaagccttggatcacgatatcaatgcattc
acaaagctaccacatacaccgcaatataggaagattttggaggcacgcaagaagctgcct
gtacgctggagtgtaggggacaccaacgcctctcatgaaatcatacagttcaccagtaat
cagatcatcgtgatggtcggtgaaactggttcaggaaagacgacacaaataccacagttt
gtcgcttatacggatttacctcacaccaagggaaaattggtcgcatgcacgcagcctcgt
cgagtagcagccatgtcagtggctaaacgcgttgccgatgaaatggacgttgaacttggg
agacaagtcggttactcaatacgttttgaggacatgactgagcctggcactacttttctc
aaatacatgacggatggtatgcttctccgggaagcaatgaatgatcctagcctcgatcgc
tattcaacgatcatcctcgacgaggctcacgaacgcactctcgccactgatatcctgatg
ggtctcctaaaagatttggccaaaagacgttcagacctcaaaattataatcatgtctgcg
acactagatgcactcaagttccagaaatactttggcctaacaagtgatacggcagcgcca
ctattcaaagttccgggacgtacacatcctgtcgaggtattttacacccaagaaccagaa
ccggattatgttgaagcagcaattcgtactgttctcatgatacatcgagccgaggatccc
ggagatgtgttgctcttccttactggagaggaagagatcgaagatgcgtgccgcaagatc
aaactcgaagcagatgacctggtaaaccaggacccagactctgtgggtcctcttatctgc
atccccttgtactcgtcgttgccgccacagcagcagcagcggatattcgacccaccgcca
tcagcacggtctcctgatggaccccctgggcgcaaaatcgtagtctcgaccaatattgca
gagacatcgctcaccattgatggaatagtgtatgttgtcgatcctgggttttcgaagcag
aaggtttacaacccgagaatccgagtggagagcttgctagtcagcccgatatctaaggcg
tcagcgcagcagagggcgggacgagctggtcgtactagacctgggaaatgtttcaggttg
tacacggagaaagattttatgtcagaattggaggagcaaacgcaccccgagattttacga
agcaaccttgcaaatactgtcttagagttggttaagttagggattaaagatcttgtaaaa
tttgactatgtagacgctccagcacctgagactttaatgcgggcattggagctcttgaat
tatttggcggcattggatgatgacggtaacctaacgcctctaggtaccataatggcggaa
ttcccgctagatcctcagttggcgaagatgctaattgtgagtccggagttcaagtgtagc
aatgaaatattaactatcaccgcaatgttgtctgtaccaaatgtatggctacgaccaaac
aaccaacggaaggaggcagatgccgcgaaagcccttctcactgtcccagatggtgatcat
ttgaccatgctcaacgtatataacaattacatacagaacaagtatgataagaattgggct
tggaccaactatctttctgcccgagcacttgcacaggccgagaacgttcgggaccagttg
aagcgtactatggagcgatttgaggtcgagcttgtgtccatcgtggaccccaacaaattg
tacctggcagtccggcaagcgcttgtatgtggctttttcatgcaggtagcccacaaggag
ggcgacaaagggaactatttgacagtcaaggacaaccaagttgttggactgcatccatca
tgtggccttgatgcacagccagactgggtaatttttaatgagtttgttttgacaacacga
ccatatatcagaacggtaacggatgtacgccctgagtggctattggagtttgcttcggtg
tatttcgatttgtcttctttcccagatggggaaacgaagcgggcgctgcaacgtgtggca
aacaagcgcgcaggtaaatctggccgggtaggtgacgacggggatggggccaagaagaag
aagctaaaaaagagcaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (40)   

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