KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111646340
Entry
111646340         CDS       T06058                                 
Symbol
papolb
Name
(RefSeq) poly(A) polymerase beta
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111646340 (papolb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111646340 (papolb)
Enzymes [BR:slal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     111646340 (papolb)
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     111646340 (papolb)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Nrap_D2
Other DBs
NCBI-GeneID: 111646340
NCBI-ProteinID: XP_023251587
Position
Unknown
AA seq 561 aa
MSRPVKSHAPPWPDTPRCYGITGPISEDLPHEADLIQTRKLIDSLKSYGVFEDDLELQHR
EKVVRRLELLYKEWLKEMCFALNIPESVTENVGGKVFPFGSYYMGAHSKGADIDALCVGP
GFLERKDFFTSFYEKLRAQQEVKHIRVIEDAFVPVIKLSYDGIEIDLVFGRVARKSIPEN
LDLLDDKLLQNMDEHCVRSLNGYRVTEEIMRLVPNIFNFRLALRAVKLWAKRRNIYSNKL
GFLGGISWAVLVARVCQVYPNATVSTLVIKFFKVYSMWVWPVPVRLRVVENRCYDLPFWD
PMVNLNDRCHIMPIITPAYPQQNTSFNVSPSTSSIITAEIERGFAVAQEIQQEEANWSKL
FEKPNFFENYQHYVLLRASSASEKQHREWVGTVESKIRLLVGILERNVHVSLAHVHLQPF
HGPGKDNNKEGVITTWMIGLSLVFNTDGSKNQKIDLTPDLLSFTETIYSQAESCRTYEEG
MTVSATYGSRENLSWEMPNGDRKRLFSPKPSHQLSATALPRHAPPAGRGQPGVKREGRPQ
SETPAKRAKADEVLPNRTTLC
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtctcgacccgtgaagagccacgctccgccatggccagacacacccaggtgttatggg
atcactggtccgatcagtgaggatctgccccacgaggctgatttgatccagaccagaaaa
ctgatcgacagtctgaagtcatacggtgtgttcgaggacgacttggagctgcagcacaga
gagaaggttgtgaggaggctggagcttctctataaggagtggctcaaagaaatgtgtttt
gcattgaacatacctgaatcagtcactgaaaatgtcggaggcaaagtctttccatttggc
tcctattatatgggagctcactccaaaggtgctgacattgacgctctttgtgtcggacct
ggatttctggagaggaaggacttcttcacgtccttctacgagaagctgcgagcccagcag
gaggtcaaacacatacgggtcattgaagacgcatttgtccccgtcatcaaactgtcctat
gatgggattgagattgacctcgtcttcggccgcgtggcgaggaagagcatccctgaaaac
ctcgaccttctggacgacaagctgttgcagaacatggatgaacactgtgtcagaagcctc
aatggctacagggtcacagaagaaatcatgcgtcttgtgccaaacatttttaacttcagg
ctggcgctgagagccgtcaagctgtgggccaaacgccgtaacatctactccaacaagctg
ggcttcttgggcgggatatcctgggccgtactggtggccagagtttgtcaggtgtacccc
aacgctacagtttccaccctggtgatcaaattcttcaaggtctactccatgtgggtgtgg
cccgtcccggtccgcctgagggtcgtggagaaccgctgctacgaccttcctttctgggat
cccatggttaatctgaacgaccgctgccacatcatgcccatcatcaccccggcgtacccg
cagcagaacacgtccttcaacgtgtctccgtccacctcgtccatcatcacagcggagatc
gagcgcggcttcgccgtcgctcaggaaatacagcaggaggaagcgaactggtccaaactc
tttgaaaagccaaacttttttgagaattaccagcattacgttctgctgcgagcgagttcg
gcctcggagaagcagcatcgtgagtgggtcggcactgtcgagtcaaagatcagactcctg
gtgggaatcctggagagaaatgtccatgtttctctggctcatgttcatctacagcctttc
catggacccgggaaggacaacaacaaagagggagtgatcacaacctggatgatcggactt
tctttggtctttaatacagacgggtctaaaaaccagaaaatagacctgacccccgacctc
ctttccttcactgaaactatctacagccaggcagagagctgcaggacgtatgaagagggg
atgaccgtctccgccacgtacggcagcagggagaacctcagctgggagatgccaaacggc
gaccgcaaaaggcttttcagtccaaaaccgagccaccaactctccgccacagcgctgcct
cgtcacgctccacctgccggccgtggccagccgggcgtgaagagagaaggccggcctcag
tctgagacgccggccaagagagcgaaagctgacgaggttctgccaaaccgcaccacgctt
tgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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