KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111648087
Entry
111648087         CDS       T06058                                 
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slal03021]
    111648087 (chd1)
   03036 Chromosome and associated proteins [BR:slal03036]
    111648087 (chd1)
Transcription machinery [BR:slal03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     111648087 (chd1)
Chromosome and associated proteins [BR:slal03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     111648087 (chd1)
    SLIK complex
     111648087 (chd1)
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 CHD1-like_C Helicase_C Chromo HDA2-3 ResIII DEAD CHDCT2
Other DBs
NCBI-GeneID: 111648087
NCBI-ProteinID: XP_023253615
Ensembl: ENSSLDG00000017244
Position
Unknown
AA seq 1800 aa
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSSQSGSSDSGSGSD
SGSQSDSDTQKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQLQRR
QSSSNSGSDEDSSSSDESDSSSGSKRRRNSGSSDSGSGSGSGSDSSAEDNSDETASDYEP
SHKIKSRKPPTKMNFRNGKKSSTQRKNTKKCSSSEDEDDNYKKVASAGPRRQATVNISYK
EDEELKTDSDDVVEVLGEDVPQPEEDEFETLERVMDSRIGRKRATGSVTTVYAVEADGDP
NSNFSPNKEAGDVQYLIKWKNWAHIHNTWETEETLKFQNAKGMKKLDNFKKKDQEKKKWL
KAASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSW
EDGALIAKKFQKCINDYMCRNQSKNIPSRDCKVLKQRPRFVPMKKQPAYIVEGLELRDYQ
LDSLNWMAHSWCKGNSCILADEMGLGKTIQTICFLNYLFNEHQLYGPFLLVVPLSTLTSW
QREIQLWATQMNVVVYLGDISSRNMIRTHEWMHVHSKRLKFNILLTTYEILLKDKSFLGS
VNWAVIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
HSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQY
YKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRAEALQQLIR
SSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKGEMRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKR
QVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNKEEL
SAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFT
MMEEEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYMLPRMRNCAKQISFNAV
EGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFNDAEIRRFVKSYKKFGGPL
ERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPDKTSGGRRGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSLLIG
IYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQK
QAGTANSRKRKPRSKKSKTLKPTKTDEVMKSPSSDAPSDKRSDDEDALNEEKEMAPTKPP
SRRGRPDRVLVKEEEDEEEEDGDEEAEPEQDEGSSSGEREVKEKEIKKEGKKEKKEDIWD
MKESKEPKEKKETKPLEAVHKQEENMDKNEVKAEVRERTKKASDVPVHITASGENVPISE
ESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKE
YSNPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTRSINIHGYK
HADVERLKDNSHQDESSRDSYSSDRHQASGRYHESSSSKERHSSESHRKTTGGESRKRPH
SSFSNGKDHRDRDHYRPDSRDRDRQDRYYNDSKHRKLEEFRSSRDHRLDVKDYSHSDQRS
SYRYHSDWQSEQRASASGPRSPRDQRSPYDSRSPMGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq 5403 nt   +upstreamnt  +downstreamnt
atggctggacgcagtgaggatgaaagtgtaagcaacagcagtggagaatcaagtaattct
gatgatgaatccggttctggatcgggttctgcatcagggtcaggctcaggctccagttcc
agctcctccagcagcagcagcagccaatcaggaagcagtgactcaggaagtggctcagac
tctggcagccagtcagactctgacacacagaaatccaaggagaagatggaaccaccaaat
aagtcaaacattgatggagctgagttctggaagtccaacccaagtatcctagcagtgcaa
aggtctgctatgctcaggaaacagcaacttcagcagcagcagcagcaactgcaacggaga
caaagctcctcaaacagtggatctgatgaggactcgtccagtagcgatgaatctgactca
tcgagtggttccaaaaggagaagaaattcaggatcctctgactctggatctgggagtggt
tctggatcagactcatcagcagaggacaacagtgatgaaacagcgtcagactatgagccc
agtcacaaaatcaaaagcagaaaacctccaaccaagatgaattttcggaatgggaaaaaa
agcagcacccagaggaagaacaccaagaagtgctcttcttctgaggacgaggacgataac
tacaagaaggtggcatcagcagggccgcggcggcaggccacggtcaacatcagctacaag
gaagacgaggaacttaagacggactcagatgatgtcgtggaagttctgggtgaagatgtt
ccgcagcctgaagaagacgagtttgaaacactggagagagtgatggacagccggatagga
agaaagagagcgacaggaagtgtaaccactgtatacgctgtagaagcagacggggacccc
aattctaacttcagccccaacaaagaggctggtgatgtccagtatttgataaagtggaag
aactgggcccatatccacaacacttgggagacagaggagacactcaagtttcagaacgcc
aagggcatgaagaaactggacaatttcaagaagaaggatcaggaaaaaaagaaatggtta
aaggcggcttcaccagaggatatagaatatttcaattgtcaggaagaattgatggatgac
ctgcactctcagtaccagttagtcgagcgaatcataggccattcaaaccagaagtcagcg
gcaggttacccagactacctgtgcaagtggcaaggcttaccatactcagagtgtagctgg
gaggatggcgctctgatcgccaaaaagttccagaagtgcatcaatgactacatgtgcaga
aaccagtccaagaacattccatccagagactgcaaggtgcttaaacagagacccaggttt
gtgcccatgaagaagcagccggcttacatcgttgaaggactggagctaagagactaccag
ttggacagtttgaactggatggcccactcctggtgcaaaggcaacagttgcatcttggct
gatgagatgggcttagggaagaccatccagaccatctgcttcctcaactatctgttcaat
gagcaccagctgtacgggcccttcctgctggtcgtgcctctctctacgctaacctcctgg
cagagagagatccagctgtgggccacgcagatgaatgttgtagtgtacctgggagacatc
agcagcaggaacatgatcaggacacatgagtggatgcatgtccacagcaagagactgaaa
tttaacatcctccttacaacatatgaaattctcctcaaagacaagtcatttttgggcagt
gttaactgggccgtcattggtgttgatgaggcgcaccgactgaagaatgatgactccctc
ctctacaagacaatgatcgacttcaagtccaatcacaggcttctgatcacagggacacca
ctgcagaactccctgaaagagctctggtccctgctgcacttcatcatgcctgagaagttt
cactcttgggagctgtttgaagaggagcatggtaaaggcagggactcgggctataccagt
ctgcacaaagaactggaacctttcctgctgcgcagagtcaagaaggacgtggagaaatcc
cttcctgccaaagtggagcagatcctcagggtcgagatgagtgctatccagaaacagtat
tacaaatggatcctgaccaggaactacaaggctctgagtaaaggtaccaaaggcagcaca
tcaggtttcctgaacatcatgatggagctgaagaagtgctgtaaccactgttacctgatc
aagcccccagaggacaacgagtttctcaacagagctgaagccttacagcaactgatccgc
agcagtgggaaactggttctgctggacaaacttctggtgcgtttgaaggagcgaggccac
agagttcttatcttctcccagatggtacggatgctggatatcttggctgaatacctgagg
agccgacagttcctctttcagagattagacggctccatcaaaggggaaatgaggaagcag
gcattggatcactttaacgctgagggctcggaggatttctgcttcttgttatcaacacga
gcgggtggtctgggtatcaaccttgcatcagctgacacggtagtcatctttgactcagac
tggaaccctcagaacgatctgcaggcccaggccagagcccacaggatcggacagaagaga
caggtgaatatctaccgtctggtgacaaagggctccgtggaggaggacatcattgagagg
gcgaagaagaaaatggtgcttgaccaccttgtcattcagaggatggacacgacagggaaa
actgtcctccacactggtgctgctccctccagctcagcacctttcaataaggaggagctt
tctgccatcctcaagtttggtgctgaggagcttttcaaagaaccagagggagaggaacag
gagcctcaagaaatggacattgatgagatcctcaaaagagccgagaccagggagaacgac
cctggaccctccacagtgggagaagaactgctttctcaatttaaggtagccaacttcacc
atgatggaggaagaggaaatagacattgactctgagcgtagtcaacgaagttgggatgac
attattcctgaggagcagaggaggaggatggaggaggaggaaagacagaaggagctggag
gaaatctacatgctaccacgcatgaggaattgtgccaaacagataagctttaatgctgtg
gagggccggcagagcaggaacaggagatactccgggtccgacagcgactccccctcagac
agaaagaggccaaagaaacgagggcggcctcggaccattccacgagaaaacattaagggt
ttcaacgatgctgagatccggaggtttgtcaagagttacaaaaaatttggaggaccactg
gaaaggttggatgctattgctcgtgatgctgaactcgtggataagtctgaacatgacctg
aaacgattggctgaaacggttcacaacggctgtgtgagaacactacgagaaaacccctgt
ggaccagacaagacctcaggaggcagacgggggaaagtaaaaggccccacattcaggatc
tctggagtccaggtgaatgccaagcttgttatctcccacgaggaagagctcgctccactc
cacaaggctattcctgctgatccagaggagagaaagaagtacatgattccatgccactcg
aaggcagctcattttgacattgagtgggggaaggaggatgactccagcctcctgataggc
atctatgagtacggttacggcagctgggagatgatcaagatggacccggacctcaacctc
acacacaagctcctaccagatgaccctgacaagaagccacaggccaaacaactacagacc
agagcagactacctcatcaagttactgagcaaggacctggccaagaaagaagcacagaaa
caagcagggacagctaattcacggaagaggaaaccaagaagtaaaaaaagcaaaactctg
aagccgacaaagacagacgaggtgatgaagagtccgtcctcagatgccccatcggacaag
aggtcagacgatgaggatgcacttaacgaggaaaaggagatggcaccgacgaagccaccg
agcagacgaggccgaccagacagagttttggtgaaggaggaagaagatgaggaagaggag
gacggcgatgaagaggcagagcctgagcaggacgagggttcttcgtcgggggagagagag
gtcaaagaaaaagagatcaaaaaagaaggaaagaaggaaaagaaggaggacatctgggac
atgaaagagtcaaaagagccaaaagagaaaaaagaaacaaagcctctggaggccgttcat
aaacaagaggagaacatggacaagaatgaagtaaaggctgaggtacgagagcgaacgaag
aaagcctccgatgtcccagtccacataacagcaagtggagagaacgtgccaatatccgag
gagtcggaggaactggaccagaggaccttcagtgtgtgtaaagagaggatgcggccggtg
aaagccgccctgaagcagctggacagacccgagaaagggctgtcggagcgcgagcagctc
gaacacacaagacaatgtctcataaagatcggagaccacatcacagagtgtctgaaggag
tattcaaatccagaccagattaaacaatggagaaaaaacctgtggatttttgtttccaaa
ttcactgagtttgatgccaggaaacttcacaaactgtataagcatgcaatcaaaaagaga
caggagaacgcccaggcaatggaacagaacactagaagtataaacatccatggctataaa
catgcagatgttgaaagactgaaggacaactctcaccaggacgagagcagcagggacagc
tacagctcagacaggcaccaggcttcaggtcgataccacgagagcagcagcagcaaggag
agacacagctcagagtcccacaggaagaccaccggaggagaatccaggaaaagaccacac
tcctccttcagcaatggcaaagaccacagagacagagaccactacagaccagatagcagg
gacagagacagacaggacagatactacaacgacagtaaacacaggaagctagaggagttt
cgcagcagcagagaccaccggctggacgtaaaggattattcccactcagaccagcgctct
tcctaccgctaccactcagactggcagtcagagcagcgggcctcagccagtgggccccgc
tctccccgagaccaacgctcaccgtatgactcacgctcacccatgggccaccgctcgcct
ttcgactactcgtcagaccacaagagcacacctgagcagatctggagcagccgcaagaca
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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