KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111654771
Entry
111654771         CDS       T06058                                 
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111654771 (apex1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slal03400]
    111654771 (apex1)
Enzymes [BR:slal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     111654771 (apex1)
DNA repair and recombination proteins [BR:slal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     111654771 (apex1)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-GeneID: 111654771
NCBI-ProteinID: XP_023261672
Ensembl: ENSSLDG00000023005
Position
Unknown
AA seq 310 aa
MKRGKKAEEASADGENDAGSAAAKKTKKAKEPEAPVLYEDPPDKMTSKDGRDANMKITSW
NVDGLRAWVKKKGLDWVREEDPDVLCLQETKCADKDLPADITSMPEYPHKYWAASDDKGG
YSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPNFYLVTTYVPNASRGLVRLDYRKT
WDEDFRAYLTELDIQKPLVLCGDLNVAHQEIDLKNPKGNKKSAGFTPEEREGFSQLLLAG
FSDSFRELYPEQTNAYTFWTYMMNSRAKNVGWRLDYFLLSSSLLPGLCDSKIRNKAMGSD
HCPITLHLAV
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaagagaggcaagaaggcagaggaggcgtctgcagacggggaaaatgacgccggctct
gctgctgcaaagaaaacgaagaaggctaaggaaccagaggccccagtgctgtatgaggat
cctcctgacaaaatgaccagcaaagatggacgagatgccaacatgaagatcacctcctgg
aatgtggatgggctgagggcctgggtgaagaagaagggcctggattgggtgcgcgaggag
gatccagatgttttgtgcctgcaggagaccaagtgtgcggacaaggacctccctgctgat
atcacctccatgcccgagtaccctcacaagtactgggctgcctcagatgataaggggggt
tacagtggtgtggccatgctctgcaagaccgaacccctcaaagtgacctatggcattggc
aaagaggagcatgacaaggagggccgtgtcatcactgcagagttccccaacttctacctg
gtcaccacctatgtgccaaacgccagcagaggcctcgtgcgcctagattatcgcaaaacc
tgggacgaggacttccgggcgtatctgaccgagctggacatacagaagcccctggtgctg
tgtggcgacctcaacgttgcacaccaggagatcgacctgaagaaccccaagggcaacaag
aaaagcgccggcttcacccccgaggagcgcgagggcttcagccagctgctgttggccggt
ttcagcgacagcttccgcgagctctaccccgagcagaccaacgcctacaccttctggacc
tacatgatgaactcccgcgccaagaacgtgggctggaggctcgattactttttgctgtcg
tcctccttgctgccaggcctgtgcgacagcaagatccgcaacaaggcgatgggaagcgac
cactgccccatcactctgcacttagctgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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