KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111655174
Entry
111655174         CDS       T06058                                 
Name
(RefSeq) lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    111655174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:slal03000]
    111655174
   04121 Ubiquitin system [BR:slal04121]
    111655174
   03036 Chromosome and associated proteins [BR:slal03036]
    111655174
Enzymes [BR:slal01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     111655174
Transcription factors [BR:slal03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    111655174
Ubiquitin system [BR:slal04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     111655174
Chromosome and associated proteins [BR:slal03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    111655174
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111655174
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC Cupin_8 F-box
Other DBs
NCBI-GeneID: 111655174
NCBI-ProteinID: XP_023262229
Ensembl: ENSSLDG00000015657
Position
Unknown
AA seq 1393 aa
MAQPAETCAESGRRLRSICRRMYDENEDLSDVEEITNIRGFSVEEKLVSDSYNANFVHLM
EGKDFTYEYVQREALRIPLIFKEKDGLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KQSQTEATNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
AHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVHSKFRFPFYHEICWYVLERYLHCLTKRSYLSQEIRKE
PVLMDYETKANTESPSSDSRSQDMNEDSCETQVREEQGEKPERVTQDGPCSPDNGRGQHL
KAVLSVDSEDSCNPCSTSLDFPKTPSDSPASESQNKWTHLTEFELSGLRTLIEKLESLPE
NKKSVPEGIENAQALLEDMKVVLKEHADDDPKLAITGLPVVYWPKKTIKPRPPNRPKPKM
AASPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPDPPMVA
TATVTALTTTSAVKRKAEREEIPKRKDEEPPKKRPPLLSLDGTPRPRLEDNPLRKKRKLF
DTNDEPVIVKKKKKLSKPDDPMTPKLLRQIKTENDHGDEDDDQEDHEEDGFPLDRIHLKE
KNEYDDEDQDEDEEEEEEETLTKERDSSAEDKGKVMLSPLLRTSAARESDHSSSNSPRAG
PSSESGEAQERSSAHLKARHQRRRLPNKELSKEFNQEIPKTEDCLSNQNHGPVKTEDSPA
NHNRRPLKNEDSVTNQNRKPLKTEDSTTNQSRRALKMEEGLANQNRRPLKTEDCLANQNH
RPIKPEPENEVEDQKPRWPLNNGSSDLGDWLRHRGREVNGTPRGYSPLGWNRSTPITPIC
PRPLPCRSPPKCIQMERHVIRPPPISPPPDRLPLNDGEAHVMRREMWMTVFSHLTHRDLC
VCMRVCRTWNRWCCDKRLWKHINLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQLSW
LINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRP
GQLDNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPLLSKLDLSYCNHVTDQSVNILTAAG
TTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMSVSVQ
FELIEEKLLQKIS
NT seq 4182 nt   +upstreamnt  +downstreamnt
atggcacagcccgcggaaacgtgtgctgaatctggacgcaggctgcgctccatctgccgg
aggatgtatgacgaaaacgaggatttgtctgacgttgaagaaattacaaacatcagaggt
ttcagcgtggaggaaaagctcgtcagtgacagttacaacgcaaactttgtccacctgatg
gagggcaaagacttcacttatgagtacgtgcaaagggaggctctcaggatcccactcatt
tttaaagagaaagatggactagggatcagaatgcctgatccagaattcacagttagtgaa
attaaaggtttagttggcagtcgtcggtctgtggatgtcatggatgtgagcactcagaaa
ggctctgaaatgagcatggctcagtttgtccggtattatgagacgccagaggaagagcgg
gacaaactcttcaatgtcatcagcttagagttcagccacactaagctggagaacctcatc
aagcgacccacagtggtggatcaagttgactgggtggacaacatgtggcctcctgatctg
aaacaaagtcaaacagaagccactaatgtaatctcagagatgaagtaccctaaagtgcaa
aggtattgtctgatgagtgtgaagggctgctacacagatttccacatcgattttggggga
acttcagtttggtatcatgtattcaagggacagaaagtgttctggctggtgcctcccacc
gctcataaccttgccctatatgaagactgggtcctgtcaggcaagcagagtgacatattc
ctgggagaccgagctgatggatgccagagagtggagctcaagcaaggatacaccttcttc
atcccatctgggtggattcatgctgtctacactccagaggacactctggtatttggaggg
aacattctgcacagctttaacattcctatgcagctcaccatccatgagatagagaatagg
accaaggttcattccaagtttcgtttccccttctaccatgagatctgctggtatgtcctg
gagagatacctgcactgcctgaccaaacggtcctacctttctcaggagatccgtaaagag
cctgtactaatggactatgaaacaaaggcaaacacagagagcccctcctctgactcaaga
agccaggacatgaacgaggactcatgtgagactcaagtgagagaggagcagggtgaaaaa
ccagagagagtcactcaggatggcccctgctctcctgacaacgggaggggccaacacctc
aaagcagttttatctgttgactctgaggacagctgtaatccttgctccacttctctagat
ttccccaaaaccccctctgactctccagcctcagagtctcagaataaatggactcatttg
acagagtttgagctgagcggactgaggacactgatagagaagctggagtcactccctgaa
aataagaaaagtgtcccagagggaatagagaacgcacaggccctgctggaggacatgaag
gttgtcttaaaggaacatgctgatgatgaccccaaattagcgatcactggacttcctgtg
gtgtactggcctaagaaaactataaagccccggcctcccaatcggccgaaacctaagatg
gcagcttctcctgcatcagcagtcaagctgtcagctagtcggggaacatctggcgcaagg
aggagaaggacccgctgtcggaagtgtgaggcatgcctgcggacagagtgtggagagtgc
cacttttgtaaagacatgaagaagttcggtgggccgggccgtatgaaacagtcctgcatc
atgaggcagtgcatcgcacctgtcctgccccacacagcagtgtgtcttgtctgtggagag
gcagggaaggaggacactgtggaggatgaggaggaaaaatttaatctcatgctcatggag
tgctctatctgcaatgagattgtccatcctaattgtcttaaggtaaaagattcaaacgga
gttgtcaatgatgagttgccaaactgctgggagtgcccaaagtgcaaccatgcagggaaa
acagggaaacaaaaaagggggccagggtttaagtatgcatcaaaccttcctggctcgcta
ctgaaagaaccacgcttaaaccgggattcaaaagaggagcctgaccccccaatggtggct
acagcaactgttactgctttgacgaccacatctgctgtgaagaggaaagcagagcgggaa
gaaatccccaagaggaaagacgaagagccgccaaaaaaacgtcctcccttgctgtctctg
gatggtacgccccgaccaaggctcgaggacaacccactaaggaaaaagaggaaacttttt
gacaccaatgatgaacctgtcattgtgaaaaagaagaagaagctttcaaaaccagatgat
cccatgactccgaagctgctgcgtcaaatcaagacagagaacgatcacggtgacgaagac
gacgatcaggaggatcatgaagaagatggattccccttggacagaattcatttaaaggag
aaaaacgagtatgatgatgaggaccaagacgaagatgaggaggaagaggaagaggagacg
ctgacaaaagagagagacagtagtgcagaggacaaaggcaaggtcatgttaagtcctctg
ctgaggacatctgcagccagagaaagtgaccattcttcctccaactctcccagagctggg
ccgagcagcgaatcaggagaggctcaggagaggagctctgctcatcttaaggctcgccat
caacggcgacgcctccccaacaaagagctgagcaaagagttcaaccaggagattcccaag
acggaagactgtctgagcaaccaaaaccacggtccagtgaagacagaggacagtccggcc
aatcacaatcgacgaccactgaagaatgaggattcagtgaccaatcagaaccgaaaacca
ctgaaaacagaggactcaaccactaatcagagccgcagggcccttaaaatggaagaaggt
ttggccaatcaaaacagacgcccgctgaaaacagaggactgcctagccaatcaaaaccac
aggccaataaaacctgagcccgaaaatgaagtagaagaccagaagcctagatggcctctt
aataacggcagcagcgacctgggcgactggctgcgacaccgcgggcgggaggtgaacggc
acgccacgcggttactctcccctggggtggaacagaagcacaccaatcacaccgatatgc
ccccggccactcccctgccggtcaccgccaaaatgcatccaaatggagcgccatgtgatc
cggcccccacccatcagccccccgcctgacaggctgcctctcaacgacggtgaagctcac
gtgatgcgacgagagatgtggatgacggtgttcagtcacctgactcacagagatctctgt
gtgtgtatgcgcgtgtgcaggacctggaacagatggtgctgcgacaagaggctttggaag
cacatcaatctaaaccgttgtaagtccatcacgccactcatgctgagcggcatcatccgg
agacagccagtagctctggacctcagctggaccaacatctccaagaagcaactcagctgg
ctcatcaacagactgccaggtctgcgtgtgctgctgctgtcgggatgctcctgggtggcc
gtctctgctctttgcacctccagctgtcctctgctgcgaactctggatgttcagtgggtt
gagggactgaaagatgcccagatgagggacctgctgtcgcccccaacagataacaggcca
ggtcagttagacaacaggagtaagctgcgtaacgtggaggacctgcgtctggcagggctg
gacatcacggacacgtctctgcgtctcatcatccgttacatgcccttgttatccaagctg
gatctcagctactgcaaccacgtgactgaccagtctgtcaacatcctgactgctgcaggg
acgaccaccagagactcgctcactgacatcaacctgtcagtctgtaacagggtcacagac
cagtcgctgacctatttcaaacgctgcggaagcatatgtcacatcgacctgcgatactgc
aaacaggtgaccaaggaaggatgtgaccagttcatcgcagaaatgtcagtcagcgtgcag
tttgaactgatagaggagaaactgctgcaaaagatcagctag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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