KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111665344
Entry
111665344         CDS       T06058                                 
Name
(RefSeq) collagen alpha-1(VIII) chain-like isoform X1
  KO
K23455  collagen type VIII alpha
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 111665344
NCBI-ProteinID: XP_023276086
Ensembl: ENSSLDG00000006992
Position
Unknown
AA seq 738 aa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NT seq 2217 nt   +upstreamnt  +downstreamnt
atggcggccgtacccctccagtctttgtctctactcgtcacagcgttccagctgtgttta
ttacgcccggcccacggcggggcgtattacggacacaagcagccgcctcaacagcaccag
cccctgccacaatacaatgacgggtatcctcagcaacagtttttgggtaacgagatgcca
cttatgccattagtgcctcagtatggaaaagagcttccacagctgcctttgcaaatgggc
aaagagaggccactgactgagggcaagggtcaaacatttcccagaggggctaaaggccca
cctccccccggcccaggcggagagggtctcagagagggaccgcaaggaattcaaggcccc
ccaggaataacgggaccgccgggaccgcaaggccccccgggactcccgggccagggaatg
ccagggtcgccgggaaagccgggacctcccggtcctcaaggttacccggggataggaaaa
cccggcatgccgggattgccgggaaaacccggaggacccggattaccgggagcgaaaggc
gacctaggtcccaacggcggcgaaggaccgaccggactccccgggccggcgggactcccg
ggtccccccggcctccccgggatttcgaaatcgggaggccaggggctgccgggacagccg
ggtcctctaggggagcccggtcaaaaaggtccacccgggatacccggtcccccgggcccc
aggggagacaaaggactcggtctacccggtttgccgggtttgaaagggcccggcggaccg
ccgggtccgcccggaaacgcgggcatgcccggcatcggtacgcccggcctcaacggtctc
cccgggcaaccggggataccgggaaagtccggtcctcccggagagccgggaccggcgggc
tcacccggcgacagaggtcatccgggaccgccgggcccgccgggaatgggaaaaccaggg
aaagacggttttagaggacaacccgggctctcgggagggaaaggggaaccgggccctccc
ggtttgccggggggtccgggatcgccgggctacggtaaaccgggctttccgggacctaaa
ggtcacaagggacacaccggtcttcccggacctccgggctctaaaggcgatagaggtcac
ggaggtctcccgggcgtcatcggtcccaccggtcccagcggcaggcccggcccgccgggt
ccgataggacctcccggcagtctgggcttcccggggcaaaagggagagtacggcgccgga
ggaccgaaaggaaatcccggaataaagggcgaattagggcctccgggtcttccgggactg
ccgggtaggtcgggagagggcgggcaacccggacagaggggtttacaagggcccatcgga
ccgaaaggagaagccggcgtcaggggtatatccggtccccccggcgcggcgggattaccc
ggaccgagaggagaggggggacaacccggagagacgggccaccaggggccgcaagggatc
ccggggctcacgggaccgggggggccgatcggacctcccgggctaccgggacaaaaaggc
gagacaggcccgcccggcaaacccggctatcccggcgacggaaagccgggaccccccggt
cacgtcggccttcaaggtaatcccggccccggcggcccgtccggacttccggggcaaccg
ggacaacccggacctcccggtcctccgggactacccgccgtatctcccgacctcggacag
atcctccccgtgaccggcccgtacggcggccaaaagcaaggctacaggaagaacggaggt
gagattagcggaaacggtccggagatgcccgcgttcacggctaagctcacgaatccgttc
cctcccgtgggttctccggtagtctttgacaaactcctgcacaacggcaatcaagattac
aatccccaaaccggcgttttcacctgtagcgtaccgggagtctactacttttcttaccac
gtccactgcaaaggaggtaacgtgtgggtggcactgatgaagaacaacgagccagcgatg
tacacttacgacgagtacaaaaagggcttgctggatcaggcttcggggagcgccgtactc
ccgttacgacaaggagacaccgtgcacatacagctgccgtcggaccaggccgcgggactt
tacgccggtcaatacgtgcactctgtgtttgccggatacttattgtacccgatgtga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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