KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111667320
Entry
111667320         CDS       T06058                                 
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
  KO
K10300  F-box DNA helicase 1 [EC:5.6.2.4]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:slal04121]
    111667320 (fbxo18)
Enzymes [BR:slal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     111667320 (fbxo18)
Ubiquitin system [BR:slal04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     111667320 (fbxo18)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 Viral_helicase1 AAA_19 F-box-like AAA_30 F-box PhoH AAA_24 AAA_11 AAA_22 AAA_12 ResIII
Other DBs
NCBI-GeneID: 111667320
NCBI-ProteinID: XP_023278754
Position
Unknown
AA seq 1017 aa
MEVAVNGKAKRRHLGPAECGELAAEGINALAHPHTLNRGRGNRDPNRGLYPTKRRKWAAP
MVAMSQLEDKDEDDDDEDNIDDATFLAVVMAPEAQSEEIEDEVDDATLLAAGTLTEPEEV
DYLEGMTAEMFGEDFDSCDSKFYKNEELVEELPDAHYGLLGSSGFLLQPQGCMDDLPEEV
LWQVLCLLSAQDLYRSVIRVCHRWRNIVQDSKFVPFKKQYYRYMMREKDTMQEIFSILKN
SSITDPALSQHSIRHLVVLMAQHKVGERLWLRDVLKCVKKHHLFPQAEASIRLRIPDIQN
HFNPCTEGPNPYAAMAVILILSQSVGDVQALVSLLTGCMSHTAITEYLSHMAMMLLALQR
SNIQISNRLHYNIYYVLHLMENGPFSVGSCQSGWPQIQLTGEQQQILTHDIQEHHVVKII
AFAGTGKTTTLIKYAEQRPDLRFLYVAFNKSVAFEAARRFPRNVDCKTVHSLAFKDVGKR
YHYRKKLTANLKAFTINAVLPDGRGGFTKAKVVTTTLNTFMASADQTITTRHVPSTHVTN
NGFRKDIDDGEKRLFVHDAQTIWNKMKDLNETNKEAYSMTHDGYLKLWQLQNPKPRLSDK
YDVLFIDEAQDCTPAIMDVLLSQRCGKILVGDPHQQIYTFKGAVNALQIVDHTHVFYLTQ
SFRFGAEIAYVGATILKVCKRVQKILVGGKQKGGVCDEAAVKVAEAVRTGASPCRGKVAI
LARCNLSVFTIAVMLTDANPQCQIHFIGDVKNIGLGRIEDIWKLKEMAGKATPGPSNISD
PLIRSFARKPQTAFWTLKKYATQTEDLELSAKLNIVEKYGSRIPELVTRLNSCSENNSHK
ADFIVGTVHKAKGLEFDTVMVTDDFTEVPCSRHNLHHHPGFAFSKFPDDEWNLLYVAVTR
ARTSLIITKSIYNILTVAGEYFLKSEMPDSLMKAGEPLPCSITNCPNCITPGSAFIMCKQ
QMQYTDGASDGGPLCERCVWTRIGPTAFLMTDDVLSMADIREQLAPPDHHVFFPNLQ
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggaggtggccgtgaacggaaaggccaagaggagacacttgggtcctgcggagtgtggt
gagctagcagcagagggcattaatgcccttgcacatccccacacccttaaccgggggcgg
ggaaaccgggaccccaacagggggctttaccccaccaagcgacggaagtgggctgcccca
atggttgcaatgagccagctggaggataaggatgaggatgatgatgatgaagataatatt
gatgatgccacttttttagctgtagtaatggcaccagaggcccagtcagaagaaatagag
gacgaagtggacgatgccacactgctggctgctggaacactgacagagcctgaggaggtg
gattatttggagggcatgaccgccgaaatgtttggtgaagactttgactcttgtgatagc
aagttttacaagaatgaagagttggtggaggagctacctgacgcccactatgggctgctc
ggcagcagcggattcctgctgcagccccagggctgcatggatgaccttccagaggaggtg
ctgtggcaggtactgtgcctcctctctgcccaggacctctaccgcagtgtcatccgcgtc
tgtcatcgctggaggaacattgtccaggacagcaagtttgtgcccttcaagaagcaatac
taccgctacatgatgcgagagaaggacacaatgcaagagatcttctccatcctgaagaac
agcagcatcacagatccagcattgtcacagcacagcattcgacaccttgttgttttaatg
gctcagcataaggtcggagagcggttgtggctgagagatgttctgaaatgtgttaagaag
catcacctttttcctcaggctgaggcctccatcagattacgtattcctgatattcagaat
cactttaacccttgcactgagggtcccaacccatacgcagccatggctgtcatattgatc
ctcagtcagagtgttggtgacgtgcaggccttggtgtctctgctcactggctgcatgtcg
cacaccgccatcacagagtatctcagccacatggccatgatgttgcttgctttacagagg
agtaacatccagatcagtaacaggttgcattacaacatctactacgtactccacctgatg
gagaacggccccttttctgtcggctcctgtcagagcgggtggcctcagattcagctcact
ggtgaacagcagcagatcctcacccacgatatccaggaacaccatgtggtcaagatcata
gcttttgcaggtacgggaaagacgaccacattgataaagtatgctgagcagcggcctgac
ctccgcttcctgtacgtggccttcaataaatcggtggcatttgaggcagcgcgacgcttc
cccagaaatgtggactgcaagaccgtccactcactggccttcaaagacgttgggaagagg
tatcattaccgcaagaagttgactgctaacctgaaggcattcaccatcaacgctgttctg
cctgatggccgaggcggttttaccaaggccaaggttgtaaccacaaccctcaacaccttc
atggcctcagcagaccagaccatcaccaccagacacgtgcccagcacccacgtcactaat
aacggctttaggaaggatatagatgatggcgaaaaacggttgtttgtccatgatgcccag
acgatctggaacaaaatgaaggatctcaacgagacgaacaaagaggcttactccatgacc
cacgacggttacctgaagttatggcagctccaaaacccaaaaccccgcctgtctgacaag
tatgatgtccttttcatcgatgaggcccaggactgcactccagccatcatggacgtgctg
ctgtctcagcggtgcgggaaaatcttggtcggagatcctcatcagcagatctacaccttc
aaaggagctgtcaacgccctgcagattgttgaccacacacacgtcttctacctgacacag
agctttcggttcggtgctgagatcgcctatgtgggcgccaccatcctcaaagtgtgcaag
agagtccagaagattcttgtaggagggaaacagaagggtggtgtgtgtgacgaggcagcg
gtcaaggttgcagaggccgtgaggacgggtgcgagtccttgccgggggaaggtggccatc
ttggcgagatgcaatctcagtgtgttcaccatagccgtcatgctgacggacgccaaccca
cagtgccagatccacttcataggagatgtcaaaaacatcggcctgggaaggatcgaggat
atctggaagctgaaggagatggcggggaaggcgacaccagggccttcaaacatcagcgat
ccacttattcgctccttcgcaagaaaacctcaaactgctttttggaccctgaagaagtac
gccacccagactgaggacctggagctgtcggccaaactcaacattgttgaaaaatacgga
agtcgaatccccgaactagtgacacgcctgaacagctgctctgaaaacaactctcacaaa
gcagactttatagtcggaacagtccacaaagccaaaggtctagagttcgacaccgtgatg
gtcaccgacgactttactgaggttccctgttccagacacaatctgcaccaccatcccggc
ttcgcgttttccaagttccctgacgatgagtggaacctgttgtatgtggctgtgactcgt
gccaggacctcactgatcatcactaagagcatctacaacatcctcacagtagccggggaa
tacttcttgaagtcagagatgcccgactcactgatgaaggcgggcgaaccgctcccatgc
tccatcacaaactgtcccaactgcatcacaccgggctcggcgttcatcatgtgcaaacaa
cagatgcaatacacggatggtgcgtcagatggcggcccgctgtgtgagaggtgtgtgtgg
acacgcatcgggccaaccgccttcctcatgaccgacgatgttctctcaatggcagacata
cgagaacagcttgccccgccagaccaccatgttttcttcccaaacctacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system