KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111668415
Entry
111668415         CDS       T06058                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03271  Virion - Rotavirus
slal04145  Phagosome
slal04510  Focal adhesion
slal04512  ECM-receptor interaction
slal04514  Cell adhesion molecules
slal04530  Tight junction
slal04810  Regulation of actin cytoskeleton
slal04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    111668415
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111668415
   04514 Cell adhesion molecules
    111668415
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111668415
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111668415
   04530 Tight junction
    111668415
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111668415
   04810 Regulation of actin cytoskeleton
    111668415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slal04131]
    111668415
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slal04147]
    111668415
   04515 Cell adhesion molecules [BR:slal04515]
    111668415
   04090 CD molecules [BR:slal04090]
    111668415
Membrane trafficking [BR:slal04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    111668415
Exosome [BR:slal04147]
 Exosomal proteins
  Proteins found in most exosomes
   111668415
Cell adhesion molecules [BR:slal04515]
 Integrins
  Integrin beta subunits
   111668415
CD molecules [BR:slal04090]
 Proteins
  111668415
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 111668415
NCBI-ProteinID: XP_023280242
Ensembl: ENSSLDG00000003954
Position
Unknown
AA seq 803 aa
MDLRLLLIASLSAVLGGSWAQPEGSICIKANAQSCGECIQVAETCGWCSDENFLTVGESK
SARCDDLESLKNRNCDVTKIENPRGSITTDKNKPVTNRKKDMAEKLKPEQITQIQPQKLT
LTLRSGEPQTFELKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDF
RIGFGSFVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLKLTENGDEFNRLVSQQQ
ISGNLDSPEGGFDAIMQVAVCEEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDAYNSLSSEVILENGRLPEGVSITYKSICKNGVEGTGENGRKCSNISI
GDEVSFRISIESQKCPSHGKSEVIKIKPLGFTEEVEIVLNFICDCQCAAEGQPNSDKCHE
GNGTFECGACKCNDGRIGRLCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGTCECK
KRENPAEVYSGKYCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLETSTC
LAKNGQICNGRGTCECGICKCTNPKFQGPTCEICPTCPGVCAEHKDCVQCRAFDAGEKKD
TCEHECSYFELIKVKDRDKLPQPTDQSFPLTHCKERDANDCWFYYTYAIRNDTKEVYVVE
NLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQG
NPIYKSPINQFQNPSYGNTAAAL
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggatctgcgtttactgttaatagcatcattatcagcggtccttggtggcagctgggca
cagccagaggggagcatatgcatcaaagcaaacgcacagtcatgtggggaatgcattcag
gtcgccgagacatgtggatggtgctcagatgagaatttcctcactgtgggtgaatccaag
tcagcccgctgtgatgatctggagtccctgaagaatagaaattgtgacgtgaccaaaatt
gagaacccacgtggaagcattaccactgacaagaacaagcctgtcaccaaccgcaagaag
gacatggctgagaagctgaagcctgagcagatcacccagatccagccccagaaactcaca
ctgacacttagatctggtgagccccagactttcgagctgaagttcaagcgtgctgaggac
taccccatcgacttgtattaccttatggacctctccttctcaatgaaagacgatttggaa
aacgtcaagaaccttggcactgacctcatgagggaaatgcaggagatcacctcagacttc
agaattggtttcgggtcctttgtggagaagactgtcatgccttacatcagcaccacacca
gccaggctcatcaacccctgcacagggaaccagaactgtaccagccccttcagctataag
aacgtcctgaagctgacagaaaacggagatgagtttaatcggctggtcagtcagcagcag
atctcaggaaacctcgactctccggaggggggcttcgatgccatcatgcaggtggcggtc
tgtgaggaacatatcggctggaggaatgtgactcgcctgctggtgttttccactgatgct
ggtttccactttgctggagacggcaaactgggtggcattgtcctgcccaacgatgggaag
tgtcatctggagaacaacatgtacactatgagccactactatgactacccctccatcgcc
catttggtccagaaactgagtgaccacaacatccagaccatctttgccgtcactgaggaa
ttccagcctgtttacaaggagttgaaaaatcttattcctaagtcagctgttggcacgctg
tcctccaactccagcaatgtgatcaaacttattattgatgcctacaattctttgtcatct
gaggtcattctggaaaacggcaggctaccagagggagtttccatcacctacaagtccatc
tgtaagaacggcgttgagggaacaggagagaacggcaggaagtgttccaacatctccatt
ggagacgaggtctctttcagaatttccattgaatcccagaagtgtccatcacatggcaaa
tctgaggtcattaagattaaaccgctgggcttcactgaggaggtggagatagttctgaac
ttcatctgcgactgtcagtgcgcagcagaaggccaacccaacagtgacaagtgccatgag
ggcaatgggaccttcgagtgtggagcctgcaagtgtaatgatggacgtattgggcgtctt
tgtgagtgcagcaaagacgaagtccggacagaggacctggatgccaactgcagaaaagac
aatggtacagatatctgcagcaacaatggcgactgtgtctgtggcacctgcgaatgcaag
aagagggaaaatccagcagaggtctacagtggaaagtactgtgagtgcgataacttcaat
tgtgaccgctccaacaacaagctctgtggaggacatgggcgttgtgaatgcaggaagtgc
atctgtgatgccaactacaccggcagtgcctgcgactgctcgctggagacctccacctgc
ctcgccaagaacgggcagatctgtaacggtcgtggtacctgtgaatgtggaatctgcaaa
tgcaccaaccccaaattccagggtccaacctgcgagatctgtcccacctgccccggtgtc
tgcgctgagcacaaagattgcgtgcagtgccgagcatttgatgctggagagaagaaggat
acatgtgagcacgaatgcagctactttgagctcatcaaggtgaaggatcgcgacaagctg
cctcagcccacagaccagagtttccctctgactcactgcaaagagcgagatgccaacgat
tgctggttctactacacctatgccatcaggaacgataccaaggaggtctacgtggtggag
aacttggagtgcccagcaggacctgacatcatccccatcgtggcaggtgtggttgcgggc
attgtgctgatcggcctcgccctgctgctcatctggaaactactcatgatcatccatgac
cgccgagagtttgccaaatttgaaaaggagaagatgaacgccaagtgggacacgcaaggg
aaccccatttacaagagtcctattaaccagttccagaatcccagctatgggaatacagcc
gctgctctttag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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