KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111669896
Entry
111669896         CDS       T06058                                 
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:slal01002]
    111669896 (usp5)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:slal04121]
    111669896 (usp5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slal04147]
    111669896 (usp5)
Enzymes [BR:slal01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111669896 (usp5)
Peptidases and inhibitors [BR:slal01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   111669896 (usp5)
Ubiquitin system [BR:slal04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    111669896 (usp5)
Exosome [BR:slal04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111669896 (usp5)
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 Pox_RNA_pol
Other DBs
NCBI-GeneID: 111669896
NCBI-ProteinID: XP_023282159
Ensembl: ENSSLDG00000024164
Position
Unknown
AA seq 849 aa
MADVGEVLMSVLSTIRVPKPGDRVHKDECALSFSSPESEGGLYVCMNSFLGFGSQYVDRH
NARSGQRAYLHITRTRKAKLFSQKEDDNNSGSGHPPKKKPTRLAIGIEGGFDVDQEQYEE
DVKVVILPDRQEVASDDLTTMPDVVRERVSLSMAGIMAADSVSHTLQVQQWDGEVRQESR
HAADLKQLDNGVKIPPSGWRCEVCDLQENIWMNLTDGKVLCGRRYFDGSGGNNHALLHFQ
ETGYPLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGIDMMTMEKTERTMTELEI
AVNQRVGEWEVIQESGTTLRPLFGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNI
DKIIDEAPSDPTQDFKTQVAKLGYGLLSGEYSKPALDPGDENGASEPRGDQIGIAPRMFK
ALVGRGHPEFSTNRQQDAQEFLLHFINMVERNCRSGPNPSEAFRFLVEERIVCQQSQKAK
YTQRVDYIVQLPVPMDQATNTEELQEAERRREEGDSSAPTVRAQIPFTACMAALSEPEIL
TDFWSSAVQAKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSAL
CATGQQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQLC
EMGFPLEACRKAVYYTGNTGIDAAMNWIMGHMDDPDFSAPLVLPGCSSVTTPTESLSEEH
LATIVSMGFSRDQATKALRATSNVLDRAVDWIFSHLDDLESMDVSEGGRSAAESEGREPP
PGPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGY
LYFYRRVAE
NT seq 2550 nt   +upstreamnt  +downstreamnt
atggcggatgttggtgaggttttgatgtcggttttgtccacaattcgggttccgaagccc
ggggaccgcgtccacaaagacgaatgcgccttgtcattttcctcgccggaaagtgaagga
ggcctgtatgtgtgcatgaacagtttcctgggctttgggagtcagtatgtggacaggcac
aatgctcggtctggccagagggcttacctgcacatcacccggactcgtaaggctaagtta
ttctcacagaaggaagatgacaataactctggatctggacacccacctaagaaaaagccc
accagactggccatagggattgaaggaggttttgatgtggatcaggagcagtatgaagag
gatgtaaaggtggtcattttacctgacagacaggaagtggcatcagatgacctcactacc
atgcctgacgttgtgagagagcgggtgtccctgtcaatggcgggtataatggcagctgac
tcagtgtctcataccttacaagttcaacaatgggacggagaggtgagacaggagtccagg
catgccgctgaccttaaacagcttgacaatggagtcaagatccctcccagtggctggcgg
tgtgaggtgtgtgaccttcaggagaatatttggatgaacctgacagacggcaaagtgctg
tgtggtcgcaggtattttgatggctctgggggcaacaatcacgcccttcttcacttccaa
gagactggatacccactcgctgtcaaactcggaaccatcactcctgatggagcagatgtg
tattcctatgatgaggatgacatggtactggattccaagttaccagagcacctatctcac
tttgggatcgacatgatgaccatggagaagactgagcggactatgacagagctggagatt
gctgtgaaccagcgtgtgggggagtgggaggtgatccaggaatcggggaccactctgcgt
cccctttttggccccgggctgacgggcatgaagaacctgggcaacagctgctacctcaac
tcggtcatgcaagtgctcttcactgttccagacttccagagcaagtacgtttctaacatc
gacaagatcattgatgaagctccaagtgaccccacccaggacttcaaaacccaagtagcc
aagctcggctacggtctgttgtcaggagagtattccaaaccagcactagaccctggagat
gaaaatggtgcatctgaacccaggggagaccaaattggcatagcaccacgaatgtttaaa
gcacttgttgggcggggccacccagagttctccaccaatcgacaacaggatgctcaggag
tttttattgcacttcataaacatggtggagagaaactgtcgctctgggcctaacccatct
gaagccttcaggttcctggtggaggagaggattgtgtgtcagcaatcacagaaagccaag
tacacacagcgggtagattacatcgttcagctgcctgtgcccatggaccaggctaccaac
acagaagagctccaggaggcagagcgccggcgtgaggagggggactcatcagctcctaca
gtgcgtgcacaaatccccttcacagcttgcatggcggccctcagtgaaccagagatcctc
acagacttctggagctctgctgtacaggccaagactactgctaccaaaacaacccgcttt
gcctctttccctgaccacctggttatccagattaagaagtttacctttggccttgactgg
gtgcccaagaaactggatgtgagtatcgacgttcctgatactctggacctgagcgcacta
tgtgcaaccggccagcagccaggggaggagcttctcccagaggtggccccgcccccactc
atgaccccagatgtggaggttaaaggtatcctgggttcccatggcaacgaggaggacgac
tcactctactccccactgctgtctcccgtcctcgatgactccactgtgtcccagttatgt
gaaatgggattcccactggaggcctgcaggaaagcggtgtactacacagggaacactgga
atcgatgctgccatgaattggatcatgggccatatggatgacccagacttctcagccccc
ctggtgttgccaggctgcagctctgtgaccactcccaccgagagcctgtctgaggaacac
ctggcaaccatcgtctccatgggcttcagccgagaccaagcaaccaaagcacttcgagcc
acgagtaatgtcctggaccgggcagtggactggatcttctcccacctggatgacctagag
tccatggatgtgtctgaaggaggccgctcagccgcagagagcgagggccgggagcctcct
cctgggccccgtgtcagagacggaccaggcaagtacgagctgtttgcattcatcagtcac
atggggacaagcacgatgtgcggtcactatgtctgtcacatcaagaaggatcagcagtgg
gtcatcttcaacgatcagaaggtgtgtgcttcagagaaacctcccaaagacttgggatac
ctctacttctatcggagagtggctgaatga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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