KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111671133
Entry
111671133         CDS       T06058                                 
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slal03032]
    111671133 (pif1)
   03029 Mitochondrial biogenesis [BR:slal03029]
    111671133 (pif1)
Enzymes [BR:slal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     111671133 (pif1)
DNA replication proteins [BR:slal03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    111671133 (pif1)
Mitochondrial biogenesis [BR:slal03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    111671133 (pif1)
SSDB
Motif
Pfam: PIF1 AAA_30 Pif1_2B_dom AAA_19 AAA_22 Herpes_Helicase UvrD_C_2 DEAD Mg_chelatase AAA_16 AAA_7 RsgA_GTPase ABC_tran AAA_5 PhoH NACHT
Other DBs
NCBI-GeneID: 111671133
NCBI-ProteinID: XP_023283924
Ensembl: ENSSLDG00000021717
Position
Unknown
AA seq 643 aa
MFAGEDGAQLQCCVAMEQLNASGQATRRQVIRKASVILGRNEFQEIILRVHDGKVPQSYH
LKEFKLFTKFAREGKCTVKLLPENIQVLISNCPPDQLSLFLKTLSIKHQAWRSSKPLSDR
EKLKAGLPRSFEAISPLQQKDIQKVNELRSKAAPKGLTDRTNNTTAARTGQQVKRSRSDS
NFSPVKTNPTKKPILSLPSRKLNKEQAAVLSAVLSGRNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHSFAGVGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEISMVEAQFFDKLESVARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKEKASFCFQARS
WRKVIQVNMELTEVRRQTDQSFISLLQAVRLGRVTEEVTAKLMESAYHHIERDGILATRL
CTHKDDVEVTNESKLQQLPGSVRVFEALDSDPALVKTIDAHSPVSRLIQLKVGAQVMLTK
NLDVARGLVNGARGVVVAFDSGKHGLPRVRFLCGATEVLKTERWVFKSGGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARNLEGLRVMDFEPRVVRSDP
DVLLFYKKLRKERLLMQVSIVSLLFIIIHVPNYSTHIKVFRVH
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgttcgccggagaggacggggcccagctgcagtgctgtgtggcgatggagcagctcaac
gcctccggccaggccacccggaggcaggtcatccggaaagcctccgttattctgggccgg
aatgagttccaggagattatcctccgggtccacgacgggaaagtcccgcagagttaccat
ctgaaagaattcaaacttttcaccaagttcgccagagagggtaaatgcaccgtcaaactg
ctccctgaaaacatccaggtgctcatctccaattgcccccctgaccagctgagcctcttc
ctcaaaaccctgagcatcaaacaccaggcctggcggagcagcaagcccctgagcgacaga
gagaagctgaaggccggtctgccccgcagcttcgaggccatcagccccctgcagcaaaag
gacatccagaaggtcaatgagctgagaagtaaagcggctcccaaaggactgacagaccgc
accaacaacacgaccgcggcaagaacaggacagcaagtcaagaggtcaaggagtgacagc
aactttagtccagtgaagacaaacccgactaagaagcccatcctgtctctgccatctcgt
aaactcaataaagaacaggctgctgttctcagtgcggtgctcagcggcaggaacgtcttc
ttcactggaagtgccggaacaggaaagtctttcttactcaagagaatcatgggatcgctt
cctccaaagagcacctttgctacagccagtacaggagtggctgcatgtcacattggagga
acaacgttacacagttttgcaggtgttggctcgggctctgccccactggagcagtgtatt
gagctggctcagaggcccggggtgctgcagcactggaccagctgtcgacacctcatcatc
gatgagatctccatggtggaggcccagttctttgacaagcttgagtccgttgcaaggtcg
gtgaggaggtccactgagccgtttggaggcatccagctgatcgtgtgtggcgacttcctt
cagctgcctccggtttctaaagggaaggagaaggctagcttctgcttccaggcaaggagt
tggcgtaaggtcatccaggtcaacatggagctaacggaagtacgaaggcaaacggaccag
tcgttcatctccctgctgcaggcagtgaggttgggcagggtgacggaggaagttacggct
aagctaatggaaagcgcctaccatcacatcgagagggacggtattctagcaaccaggctg
tgcacacacaaggatgacgtggaggtcacaaacgagagcaaactccagcagctgccaggg
tcagtacgtgtgtttgaggcacttgacagcgacccggccctggtgaagactatagacgct
cacagccccgtcagcaggctgatccaactcaaagtgggagctcaggtcatgctgacaaag
aacctggatgttgctcgaggtctggtgaatggagcacgaggggttgttgtggcttttgat
tctggaaaacatggactcccacgtgttcgtttcttgtgcggcgctacagaggtgctgaag
acggagcgctgggtgttcaagtccggtggtgggatccatctgagtcgacagcagttgccg
ctcaaacttgcctgggccatctccatccacaagagccagggaatgacactggactgcgtg
gagatctctctggcacgtgtctttgagagcggacaggcctacgtagccttgtctcgagct
cggaacctggagggtctgagggtcatggactttgaaccccgtgtggtgcgttcggatcca
gatgttctcctcttctataagaaactgaggaaagagaggctgctcatgcaggttagtata
gtaagtctacttttcatcatcattcatgtaccaaattacagtactcacattaaagtgttt
agagtgcattga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (16)   
   Pfam (16)   
All databases (30)   

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