KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111671425
Entry
111671425         CDS       T06058                                 
Symbol
papd7
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD7
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111671425 (papd7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111671425 (papd7)
   03016 Transfer RNA biogenesis [BR:slal03016]
    111671425 (papd7)
Enzymes [BR:slal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     111671425 (papd7)
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     111671425 (papd7)
Transfer RNA biogenesis [BR:slal03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    111671425 (papd7)
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 Polbeta TUTase PAP_NTPase
Other DBs
NCBI-GeneID: 111671425
NCBI-ProteinID: XP_023284279
Position
Unknown
AA seq 829 aa
MDPRVAWIQPEQKGPANALWMHVWETSQGVRTLSAQQQLHNQNHNQCVNYAALDVLKNVA
TAVASSKSICSSNGNVTANRSNGSSHHSIMNGTTSINGTAISSLGIALSNGNVHNAFSTA
NTAEPGEGKILPQKTGSVSSSSSSQESGTDSPPSSCSLERTMGVNVSGNINKNVGGANLL
FSLSDSMDNNVNLYHHHHHRHLQEHPAFNLQQICVKRHQVHPSVPVNHTHNHHPGRRKSD
NKASTYGMNYLLSNCTNGNYASTWTPWKTRKYNPGVMGLHEEVMDFYNFMSPRPEEAAMR
KEVVNRIEMIIKELWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQELEQALRKH
NVAEPFSIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAASFIKDYVKKYPVLPYLI
FVLKQFLLQRDLNEVFTGGISSYSLILMVISFLQLHPRIDARNPNENLGVLLIEFFELYG
RHFNYLKTGIRIKNGGAYIAKEEIMKAMTNGYRPSMLCIEDPLLPGNDVGRGSYGAMHVK
QVFDYAYTVLSHAVSPLARSYPNKDCESTLGRIIRLTQEVIDYREWIIKKWGGRDLTRTD
NRVSPPKEPVSEQDPSCVLRGGVGSEEQQRDSVSPHSADSPMSISSPQQHSSASSVSSLS
GSDNDSDSTLPCPVPPPALPPYPSFPHLGLALPPGLSMGTGKPGMGGHHLLMPPGSQARV
SLPGGLAMHSIPGRQVCIDTGLPPFFHMPPPAHAHAPAPSSPQPPPSPHSSHTHKNGTKF
NVKGFHNPPLVNGPALANRGHTHAHTHTQYHRNTWRRRKRDSLPVSLSR
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggatccgagggtagcttggattcagcccgaacagaaaggacctgcgaacgccttgtgg
atgcacgtctgggagacctctcagggagtacggacgctctccgctcagcaacagctccac
aatcaaaaccacaaccagtgtgtcaattacgctgcgttggatgttttaaaaaatgtggcg
accgcggtggcatcgagcaagagcatttgcagcagcaacggtaacgttactgccaatcgg
agcaacggcagcagccatcacagcatcatgaacggcactactagtataaacggcactgcg
atttcctcgctggggatagcactgtccaacgggaacgtacataacgctttcagcacggca
aacaccgctgaaccaggtgagggaaaaatccttcctcagaagacgggatctgtctcctcc
tcgtcctcctcacaggaatccgggacggacagtcccccctccagctgctcacttgagagg
actatgggtgtaaatgtatcgggcaacattaataaaaacgtcgggggtgccaatctgctc
ttcagcttgagcgacagcatggacaataatgtcaacctttaccaccaccatcatcatcgt
cacctacaggagcacccggctttcaatttacagcagatctgcgtgaagcgtcatcaggtt
cacccctctgtacctgtaaatcacacacacaatcaccacccaggccgaaggaaaagtgac
aacaaggcgagcacttatgggatgaattacttgctttcaaactgcactaatggcaattat
gcgagcacttggacaccctggaagacgaggaagtacaaccctggggtcatgggtctccac
gaggaggtgatggacttctacaacttcatgtctcctcggccagaggaagcagctatgagg
aaggaggtggttaaccggatagagatgatcatcaaggagctgtggcccacagcagatgtc
caaatctttggcagcttcagcacaggactctaccttccaacaagtgacattgacctggtg
gtgtttgggaagtgggagcgccccccacttcaagagctggagcaagctcttcgcaaacat
aacgtggcagaaccgttctccatcaaagtgctggacaaggctacagtgccaatcatcaag
ctgacagaccaggagactgaggtgaaggtggacatcagtttcaacgtggagactggagtc
aaggcggcaagcttcattaaagactacgtaaagaagtatccagtgctgccttacctgatc
tttgtgctgaagcagtttctgctgcagagagatctaaatgaagtcttcaccgggggcatc
agctcctacagcctcatcctcatggtcatcagcttcctgcagctccatcctcgtattgat
gccaggaaccctaatgagaacttgggggtcttgctgatcgagttctttgagttgtatggc
cgccatttcaactacttgaaaacagggatccgcatcaaaaatggaggcgcatacatagcc
aaagaggagatcatgaaggccatgacaaatggatacaggccatccatgctctgcatagag
gacccactgcttccaggtaatgatgtggggagaggttcctatggtgccatgcatgtcaag
caggtgtttgactatgcctacactgtcctgagtcatgctgtgtcaccacttgcacggtca
tatcccaacaaagactgtgaaagcaccttgggcaggataatcaggttgacccaggaagtg
atcgactacagggaatggatcattaaaaagtggggcggcagggatctgacgcgaacagac
aacagagtttcacctcccaaggagcctgtgtcagagcaggatcccagctgtgtgctgcgt
ggtggtgttgggtcggaggagcagcagagggactcagtgtctcctcacagcgcagactcc
cccatgtccatctccagccctcagcagcactcgtcagcctcctctgtctcctcgctgtct
ggatcagacaatgactctgattcgacgttgccatgtcccgtccctccgccagccctgcca
ccatacccatctttcccacatctgggcctagctttgccaccaggactcagtatgggcacc
ggcaagcccggcatgggaggacaccatctgctcatgcctccaggctcacaggctcgcgtc
tcactgcccggtggtctagcaatgcactccatacctggcagacaggtgtgtatagacacc
gggctcccccccttcttccacatgccccccccagcccatgctcatgcccctgccccttcc
agcccccagcctccgcccagcccccactccagccacacacacaagaacggaaccaagttc
aatgtgaagggcttccacaacccgccactggtcaacggccccgctctggctaaccgtgga
cacacacacgctcacacacacacacagtatcaccgcaacacctggcgacgcaggaagagg
gacagtctaccggttagcctcagcagatag

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