KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111671468
Entry
111671468         CDS       T06058                                 
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
  KO
K15732  RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:slal01009]
    111671468 (ctdp1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slal03021]
    111671468 (ctdp1)
Enzymes [BR:slal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     111671468 (ctdp1)
Protein phosphatases and associated proteins [BR:slal01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   111671468 (ctdp1)
Transcription machinery [BR:slal03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     111671468 (ctdp1)
SSDB
Motif
Pfam: FCP1_C NIF Biotin_lipoyl BRCT Nairovirus_Gn PTCB-BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 111671468
NCBI-ProteinID: XP_023284330
Ensembl: ENSSLDG00000003779
Position
Unknown
AA seq 1010 aa
MEDPPADSGGGGGGAAAEGPAVQVADICWPTGAIPLRLLEWKVKPGSLVNVDSVLALCAP
IPQEKGAEAARLPEKKVKSDRAGVVKELCCQLGQVIPPGGVIVRIEECSHPIVMKGLCAE
CGQDLTQLQSTNGNQQTPISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNKKLVLM
VDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVFT
FGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDRED
VWKFAPNLITVKKYIYFQGTGDINAPPGSREAQMARKAGGPSSRPADSTESAGTPGAEEQ
NNGLRKRARDHNVSGKDEPTTSQSSQGVPTNERTHPTGVSEDESGQSKESVTEVVPGAGS
RETREGDRTNVKEDDSNRTQEAQEGVNSSAPSHESNNLDFDLSSDSDNDSITEKPPSSED
DSEGNPGQAKKEGVTQEPSDREGARIGDSKCRGEGENSSDAAEPSGVLLPDPELGNGCSD
RREPETESQNSEQSGVTMGEELLDQSMEEEEEEEEEEADNDQDDHLIYLEEVLERIHGEY
YARYEAFLKKEASETPDIRKIVPELKGKTLEGTMIVFSGLYPTNYPMERTREYYHAKALG
AKIGKNLVLSSLEPSRTTHLIAARAGTEKVRQGQGCKHLYVVNPDWLWSCLERWERVEEQ
LYPLKEDYSKTPRSNSPAAFPDNQSSLHKPIFHPAPIHHRPPPPAPEVRTYDPVTGKLIR
RGPQVSRPPPYLQASGSLLLSDHREQSCLRGTSKTQQDDAAGSSQDDEQPGPSRRKRQPS
MSETMPLYTLCKEDLESMDKEVDDILGEESDNESEGRGKEKPGNEEAEDEEEERRRRQQQ
QHQHQQQQQRRQQQQPGAGQIAAAGGLGPQALSMEERLHTPASEASLPSCVLRGHKRKHE
EAKEEEDEEEVENKQSADESSKDSNEEEEGSSSEADEMAAALEAELNDFM
NT seq 3033 nt   +upstreamnt  +downstreamnt
atggaggatcctcctgcagattctggcggtggtggcggcggtgcagcagcggagggcccc
gcggtgcaggtggcagatatctgctggccgaccggggctatcccgctacggcttctggag
tggaaggtcaaacccgggtctcttgttaacgtggactccgtgttggcactgtgtgctccc
ataccccaggagaaaggggcagaggctgccaggctgccagagaagaaggtgaaatcggac
cgtgctggagtagtgaaggagctatgctgtcaacttggacaagtcatacctcccgggggt
gtcattgtcagaatagaagaatgcagccacccgatagtgatgaagggtttatgtgctgaa
tgtggccaggacctgactcagctgcagagcacaaatgggaaccagcaaactcccatctcc
acagcaacagtctccatggtgcacagtgtccccgagctgatggtcagctcagagcaagca
gaacagctgggcagagaagaccagcagagactccacagaaacaaaaagctggtcctgatg
gtagatctggaccagaccctgatccacaccactgaacagcactgccagcggatgtccaat
aagggcattttccatttccagctcgggcgtggagagcccatgctccacacacgactacgc
ccgcattgtaaggaattcctggagaaaattgccaaactctatgagttacacgtcttcacg
ttcgggagccgcctttatgcacacaccatagctggcttcctggatcctgaaaagaagctt
ttctctcatcggatcctttctagagatgaatgcatcgatcctttctccaagacggggaat
cttaggaaccttttcccttgtggggattcgatggtctgcataatcgatgaccgagaggac
gtgtggaagtttgcacctaacctcatcactgtgaagaaatacatttacttccaaggcaca
ggggacatcaatgctccccccggatcacgggaagctcagatggccaggaaagcaggaggc
ccctcaagtcggccggcagacagcacagaatcagcagggacacctggtgcagaagagcaa
aataatggcctcaggaaaagggcgagggaccacaacgtttccggaaaggatgagcccaca
acatctcagtcttctcagggagtaccaacaaatgaacggactcatcccacaggggtttcg
gaggatgaatcaggacagagtaaagagtcagtgactgaggtggtgcctggggcggggtca
agagaaactcgggagggggatagaacaaatgtaaaggaggatgatagcaacaggacgcaa
gaggcgcaggaaggtgtaaactcatcagcgcccagccatgagtccaataacttggacttt
gacctttccagtgacagtgacaatgactccattacagaaaagcctccttcatcagaggac
gatagtgaaggcaatcctggacaagcaaagaaggagggtgttacgcaagagcccagtgat
agggaaggggcgaggataggggacagtaaatgtcggggggaaggagaaaacagctcagat
gcagcagaaccttcaggagttcttctcccagaccccgagctgggaaatggctgctcagat
aggagagagccagaaacagagtctcagaatagtgaacaatctggggtcaccatgggggag
gagctgctggaccagagcatggaggaggaggaggaggaggaagaagaggaagctgataat
gaccaggacgaccacctgatctacctggaggaagtgctagaaaggattcacggcgagtac
tatgcccgctacgaggccttcctgaagaaggaggcctccgagacgccagacatccgcaag
attgtcccagagctgaaaggcaagacactggagggcacaatgatagtgttcagtggtctg
tacccgaccaactaccccatggagaggactcgtgagtactaccatgccaaggcactgggg
gccaagatcggcaagaatctggttctcagctccctagaacccagtcggacaacacatctc
atcgcagcacgagctggcaccgagaaggttcgtcagggacagggctgcaagcacctctat
gtcgtcaaccccgactggctgtggagctgtctggagcgctgggagagggtggaggagcag
ctgtacccgctaaaggaggactactccaagacgccacggagcaacagtccagcagctttc
cctgacaatcagagctccctgcataagcctattttccacccagctcccatccaccacaga
cctccacctccagccccagaggtccggacctacgaccccgtcacagggaagctgatccgc
aggggccctcaggtgtcacggccaccgccctatctccaggcatcagggtctttgttgctc
tctgatcacagagagcagtcttgtctcaggggaacttcaaagactcagcaggatgacgcg
gcggggtccagccaagacgacgagcagccgggaccatcgcgtcggaaacgacagccgagc
atgtcagaaactatgcctctatacacactgtgcaaggaggatctggagagcatggacaaa
gaggtggacgacatcttgggtgaagagagcgacaacgagagtgaagggcgaggaaaggag
aagccaggcaatgaggaggcggaagatgaagaggaggagcggcggcggcggcagcagcag
cagcatcagcaccagcagcagcagcagcggcggcagcagcagcagccaggagctggacag
atagcagcagcaggaggactcggtcctcaggcgctgagcatggaagagaggcttcacaca
ccagccagcgaggccagtctgccaagttgtgtgctaaggggccacaaacgtaagcacgag
gaagccaaggaggaggaggacgaggaggaggtggagaataagcagtctgctgacgagtcc
tccaaagactccaacgaggaagaggaaggcagcagctcagaggcggacgagatggccgcc
gccttggaggcagagctcaatgactttatgtga

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