KEGG   Sugiyamaella lignohabitans: AWJ20_1962
Entry
AWJ20_1962        CDS       T05270                                 
Symbol
SDO1
Name
(RefSeq) guanine nucleotide exchange factor SDO1
  KO
K14574  ribosome maturation protein SDO1
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AWJ20_1962 (SDO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slb03009]
    AWJ20_1962 (SDO1)
Ribosome biogenesis [BR:slb03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    AWJ20_1962 (SDO1)
SSDB
Motif
Pfam: SBDS_domain_II SBDS_C SBDS
Other DBs
NCBI-GeneID: 30033821
NCBI-ProteinID: XP_018736851
UniProt: A0A167ER49
Position
B:2139..2819
AA seq 226 aa
MLTSGSSSHNSHSNIDREKDLDEVLQIPQVFVHVSKGQVANNEDLKAAFGTTDQNVIIQE
ILKKGELQVGGKEREALSNQMHAEIIQLIAAKCVNPGTKRPYPTSIIDKALSESNFNMVP
NKSAKIQALDAIKLLMQSNIIPIVRARMKVLIRVDSSKDAKKFSDKVKALTAEIDDEDWS
GKWELTAFIDPGNFRILDELIQKETKGRGSVEVLDTAVVKEGDQDL
NT seq 681 nt   +upstreamnt  +downstreamnt
atgctaacgagtggaagttcctcacataatagtcattctaacatagacagggagaaggat
ctcgatgaagtcttacaaattcctcaggtattcgttcatgtttccaagggccaagttgcc
aacaacgaagatttgaaagctgcgtttggtaccactgatcaaaatgttattattcaggag
atacttaagaagggagaactacaggtcggtggcaaggagcgagaggccttgtccaaccag
atgcatgctgaaattattcaacttatagctgctaaatgtgtgaatcctggcacgaaacgt
ccatatcctacttcaatcattgacaaggcactatctgagagtaattttaacatggttcct
aataaatctgccaaaatccaggccctagacgcaattaaactcctgatgcaaagtaatatt
atccctattgtacgagcgagaatgaaggtcctaattcgagtagattcgtcaaaggatgca
aagaaattttcggacaaagttaaagctctgacagcggaaatagatgatgaggattggtct
ggtaagtgggaacttactgcgtttattgatccaggtaatttcagaatacttgatgaactc
atacaaaaagaaacaaaaggcagaggctctgtcgaagtacttgacactgccgttgtcaaa
gagggtgatcaggatctataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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