KEGG   Sugiyamaella lignohabitans: AWJ20_2304
Entry
AWJ20_2304        CDS       T05270                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03030  DNA replication
slb03410  Base excision repair
slb03420  Nucleotide excision repair
slb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWJ20_2304 (RFC5)
   03410 Base excision repair
    AWJ20_2304 (RFC5)
   03420 Nucleotide excision repair
    AWJ20_2304 (RFC5)
   03430 Mismatch repair
    AWJ20_2304 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slb03032]
    AWJ20_2304 (RFC5)
   03036 Chromosome and associated proteins [BR:slb03036]
    AWJ20_2304 (RFC5)
   03400 DNA repair and recombination proteins [BR:slb03400]
    AWJ20_2304 (RFC5)
DNA replication proteins [BR:slb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    AWJ20_2304 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    AWJ20_2304 (RFC5)
Chromosome and associated proteins [BR:slb03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    AWJ20_2304 (RFC5)
DNA repair and recombination proteins [BR:slb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     AWJ20_2304 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    AWJ20_2304 (RFC5)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 ATPase_2 DNA_pol3_delta AAA_16 ABC_tran Rad17 Rep_fac_C AAA_24 AAA_33 DUF3802 Mg_chelatase
Other DBs
NCBI-GeneID: 30034201
NCBI-ProteinID: XP_018737176
UniProt: A0A167F1B1
Position
B:complement(949020..950087)
AA seq 355 aa
MSLWVHKYMPKSLDTLDYHDGLSKSLKSLAASGEFPHMLMYGPSGAGKKTRVMAVLRELY
GPGVSKIKIDGRVFQTNSKKVEFNIVSSVHHLEITPSDMGNNDRVVIQDLLKEIAQTQQV
DLSSKQRFKVVVINEADSLTRDAQSALRRTMEKYSPNLRLILLATSTSNIIGPIKSRTLL
VRVAAPTNQEIANVLSKVAKKEKVDLPSSPDDLQYLWDKIARQSQRNLRKSLLILEAMYA
QNDKITRDTPVPPADWELVISKLADDTIKKRSVAQLLQIRGTLYELLTHCIPAPVILKSL
TFSLLKKVSPEVGADIIEAAGFYDHRLRQGSKAIFHLEAYVARVMNLLETFDMTH
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgtcgttgtgggtacataaatatatgccaaagagtttggacactcttgactatcatgat
ggattgtccaaatcattaaaatcgctagcagccagcggagaattccctcatatgctgatg
tatggtccatcaggtgctggcaagaaaacgcgtgtcatggctgtattaagagaattatac
ggtccaggtgtatcgaaaattaagatcgatggtagagtcttccaaacaaacagcaagaag
gtggagtttaatatcgtctcgtcggtacaccacctggagatcactcctagtgatatggga
aacaatgacagagtagtgatccaagatctattaaaagaaattgcccaaactcagcaagtt
gacttgtcttccaaacagcgatttaaagtcgttgttatcaatgaagcagactcgttaacc
cgtgatgctcaatcggctttaagacgtactatggagaaatattcacccaatctacgattg
attctactagccacttcgacttcgaacattattggccccatcaaatcgcgaacgttactc
gtaagagtggcagctcccaccaatcaagaaattgcaaacgtattgagcaaagtggccaag
aaagaaaaggtcgacctgccatcatctccagatgacctccagtatctttgggacaagatt
gccagacagtcacaaagaaacctccgtaagagcttgcttattctcgaagctatgtatgca
caaaatgataaaatcacacgagacacgccagtgccgcctgctgactgggaactcgttatc
tctaaactagccgacgatactattaagaagagatcagtggcccaacttctacaaattcgt
ggtaccctatatgaactcctcacacactgcattccagctcctgttattctcaaaagtctc
acattcagccttctgaaaaaagtgtctcctgaagtaggtgccgacatcatcgaggccgcg
ggtttctacgaccaccgtctccgccagggtagcaaggccattttccacctcgaggcctat
gttgcccgagttatgaaccttctcgagacctttgacatgacccattaa

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