KEGG   Sugiyamaella lignohabitans: AWJ20_3521
Entry
AWJ20_3521        CDS       T05270                                 
Symbol
PRP45
Name
(RefSeq) mRNA splicing protein PRP45
  KO
K06063  SNW domain-containing protein 1
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AWJ20_3521 (PRP45)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slb03041]
    AWJ20_3521 (PRP45)
Spliceosome [BR:slb03041]
 Complex B
  Other components
   Prp19-related factors
    AWJ20_3521 (PRP45)
 Complex C
    AWJ20_3521 (PRP45)
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 30035553
NCBI-ProteinID: XP_018738354
UniProt: A0A161HNU4
Position
B:4444588..4446216
AA seq 542 aa
MMSRQSVGSFLPKPKNAEKENPRYAEVVSEDEADASVSKSTSISIRNESVAIVKPKTSTT
LALQRNSQGALDYSGVIARQGHDSKRIIQTSYSDLIPLRQRAAEINLEKPTQEQVDLTTE
RTKAALEKIISGKVESSRPQSVVKKANEPTYVRYTPASAPASGSAPRQRIIKMVDRAEDP
LAPPKFKHTKVPGGPPSPPPPVLRSPPRKLTAKDQEDWYIPPSVSNWKNPKGFTIALDKR
VAADGRGLQEAVVNDNMAKLAEALYAADRSARDEIRQRAAMQQKLAERENAVKEEKLRQL
AQQAREERTKISASSSATRPRDEFRDRSPVRRKRSVSRSDSRSISRSPDRSRSPSYRRRS
RSPSRSPDRGEQERARIRSERKKEAERELRKSRMGAERRVKMLARENDRDISERVALGVA
KPTRATGESQFDARLFSQTSNSGGLGGSGYSEDQVYDKSLFSAQEAVRSIYRPRGNVDAD
DGGDAELDRINKEKRFQGLGALKESEGGSEGPVEFVKDTDDDPFGVNQMVDQVKKNTKYG
LN
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgatgtctcgacagtcagttggatcttttctaccgaaaccaaagaatgctgaaaaagag
aatccccggtatgctgaagtagtctccgaagacgaagcggatgcctcagtgtcaaagtca
accagtatatccattagaaatgagtcagttgcaatagtaaagccaaagacctcgactact
ttggcccttcaaagaaattctcaaggtgcacttgattatagtggggttatcgccaggcag
ggccacgattccaaacgtatcatacaaacttcgtactcagacctgattccacttcgacag
cgagctgcggaaataaatctcgaaaagcctacccaagagcaagttgatctcactaccgag
cgtacaaaggctgctctagaaaagatcatatctggaaaggtagaatcatctcgaccccag
tctgtggtcaagaaagccaatgaacctacatatgttcgatatacaccagcaagcgcgcca
gcatcaggctctgctccaagacaaagaattataaaaatggttgaccgagcagaggaccct
ttagcgcctccaaagtttaagcatacaaaagtaccaggaggtccaccttcacctccacca
ccagtactacggtctccaccgaggaaactaacagcaaaggatcaggaagattggtatatt
ccacctagcgtttcaaactggaaaaatccaaagggttttactattgcattagacaagaga
gtggctgctgatgggagaggtcttcaagaagctgttgtcaatgacaatatggccaagctt
gctgaagctttatatgctgctgaccgcagtgcaagggacgagattcgtcagcgggcagcc
atgcaacaaaaacttgctgagagagaaaatgcagttaaagaagaaaaattgaggcagttg
gcccaacaagctagggaagaaagaaccaagattagtgccagttcgtctgccacccgtcct
agagatgagtttagagataggtctccggtcagaaggaagcgatcagtatctagatctgac
tcgcgctcaatatctcgctcgccagatcgctccagatcaccctcatatcgacgccgttca
aggtcaccctcccgctcgccagacagaggtgaacaagagcgtgctcgtatcagaagtgag
cgtaagaaagaagcggagagagaactaagaaagtcgcgaatgggtgctgaacgtagggtt
aagatgcttgctcgcgaaaatgatagagatatttctgaaagagttgcgctaggcgttgct
aaaccgactagagccactggtgaatcgcagtttgatgctcgacttttcagtcaaacatct
aattctggcggtcttggaggaagcggttatagtgaagaccaggtttatgataaatcctta
ttttcagcccaagaggcagttaggtcaatctatcgacctcgtggcaacgtggatgccgat
gacggtggcgatgcagaacttgacagaatcaataaagaaaagcgattccagggacttggc
gccctaaaagagtcggaaggaggtagtgaaggaccagttgaatttgttaaggatactgat
gatgatccattcggagttaaccagatggttgaccaagttaagaagaatactaaatatggc
ttgaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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