KEGG   Streptomyces lydicus A02: T261_0209
Entry
T261_0209         CDS       T03756                                 
Name
(GenBank) ECF RNA polymerase sigma factor SigC
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
sld  Streptomyces lydicus A02
Brite
KEGG Orthology (KO) [BR:sld00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sld03021]
    T261_0209
Transcription machinery [BR:sld03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     T261_0209
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_AsnC-type
Other DBs
NCBI-ProteinID: AJT61900
Position
complement(196693..197268)
AA seq 191 aa
MDDEHLTDLALAAGHGDAVAVERFIRASHRDVWRFVAHLSGDTNGADDLAQETFLRALTG
LPGFAGRSCARTWLLSIARRVVIDRYRSAAARPRIADVEDWQAVAEHRQPSGLPGFEDGL
ALGELLDALDGERREAFVLTQLVGMPYADAAAVVGCPIGTVRSRVARARADLIGWLRSAE
TCARVPRVVAT
NT seq 576 nt   +upstreamnt  +downstreamnt
gtggacgatgagcacctgaccgacctggccctggccgcggggcacggtgacgcggtcgcc
gtcgagcgcttcatccgcgccagccaccgggacgtatggcgattcgtggcgcacttgagc
ggcgatacgaacggggccgacgatctggcccaggagacctttctgcgggccctcaccggc
ctcccgggtttcgccggccgctcgtgtgcccgcacctggctgctgtccatagcccgccgg
gtggtgatcgaccgctaccgctccgccgccgcccgtccccgtatcgccgacgtcgaggac
tggcaggcggtcgccgaacaccggcagccgagcggactgcctgggttcgaggacggtctg
gcgctgggcgagctgctcgacgcactggatggcgagcggcgcgaggcattcgttctcacc
cagctggtcgggatgccgtacgcggatgccgcggcggtggtgggctgtccgatcggcacg
gtgcgctcccgggtggcccgcgcccgcgccgacctcatcgggtggctgaggtctgccgag
acctgtgcacgagtccctcgggtggtggcgacgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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