KEGG   Staphylococcus lugdunensis HKU09-01: SLGD_00798
Entry
SLGD_00798        CDS       T01177                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
slg  Staphylococcus lugdunensis HKU09-01
Pathway
slg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:slg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SLGD_00798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slg03021]
    SLGD_00798
   03400 DNA repair and recombination proteins [BR:slg03400]
    SLGD_00798
Enzymes [BR:slg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SLGD_00798
Transcription machinery [BR:slg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SLGD_00798
DNA repair and recombination proteins [BR:slg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SLGD_00798
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF961
Other DBs
NCBI-ProteinID: ADC86946
Position
848429..849373
AA seq 314 aa
MIEIEKPRIETIEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEI
LNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatagaaatcgaaaaacctagaattgagacaattgaaattagtgatgatgctaaattc
ggtaagttcgttgttgaaccactagaacgtggctacggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaaatacatcgagattgaaggc
gtattacacgagttttcagcaatagataatgtagtggaagatgtatctacaattatcatg
aacatcaaaaaactagcattaaaaatctattctgaagaggataaaacgttagaaattgat
gtacgagatgaaggcgaagtaactgcaagtgatatcacacatgatagtgatgttgagatt
ttaaacccagagcttaaaatcgcaaccgtgtctaaaggtggacatcttaaaattcgtctt
gttgctaataagggtagaggttacgcattagcagaacaaaacaacactagtgatttacca
attggagtaattcctgttgattcactttattcacctgtagaacgtgtaaactatacagtt
gaaaatacacgtgtaggtcaaagtagtgattttgataaattaacattggatgtttggaca
aatggttcaatcacgccacaagaatcagtatcattagctgctaaaataatgactgagcac
ttaaatatctttgtaggtcttactgatgaagctcaaaatgctgaaattatgatcgaaaaa
gaagaagaccaaaaagaaaaagtattagaaatgtctattgaagaattagacttatctgta
cgttcatataactgtttaaaacgcgcaggaatcaattctgtacaagagttagctgataaa
tcagaagctgatatgatgaaagtgcgtaatttaggtcgtaaatctcttgaagaagttaaa
tacaaattagaagatttaggtttaggtttaagaaaagaagattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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