KEGG   Spirosoma linguale: Slin_2266
Entry
Slin_2266         CDS       T01156                                 
Name
(GenBank) alanine racemase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
sli  Spirosoma linguale
Pathway
sli00300  Lysine biosynthesis
sli00470  D-Amino acid metabolism
sli00550  Peptidoglycan biosynthesis
sli01100  Metabolic pathways
sli01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sli00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Slin_2266
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Slin_2266
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Slin_2266
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Slin_2266
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sli01011]
    Slin_2266
Enzymes [BR:sli01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     Slin_2266
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     Slin_2266
Peptidoglycan biosynthesis and degradation proteins [BR:sli01011]
 Precursor biosynthesis
  Amino acid ligase
   Slin_2266
  Racemase
   Slin_2266
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase
Other DBs
NCBI-GeneID: 8726007
NCBI-ProteinID: ADB38287
UniProt: D2QEN5
Position
complement(2745690..2748197)
AA seq 835 aa
MLTKEFQLTNRHWFTDSRQVTGHAADSLANEAVFFAILGEHHDGHAFIGDLYRKGIRQFV
IERSALTPERREELATYADAQFTKVDSSLQTLQTLAAEHRRQFRIPVIGITGSNGKTIVK
EWLAQLLADEYVIARSPKSYNSQLGVPLSVHQLNESHTMAIFEAGISQTQEMQALEAIIR
PTIGIFTNIGTAHDQGFRTRKQKVAEKLRLFIHAGTLIYCTDYADIDEEVNLLLKAVNPD
MRFITWSLTGQKATYQGRIAGNQVSLTGKNTGFDQPLTLPFTDPASVENLMHCLVTMLSL
RTWSAAELQSRLNRLRPVSMRLEQKEGINNCELIDDSYNNDMVGLQLALRFLNQQGTRSR
RIVILSDVLQTGQPEAEFYEQVGNLMRANEVGQFIGIGPVVSRNKLFFADGSQFFATTEE
FLAQFSFSELRDSTVLVKGARPFSFERIVHRLERKVHGTVLEINLDALTHNLNYYRERIS
RNDGPSETKIMVMVKAFAYGSGSAEVAQLLQFHRVDYLAVAYADEGVSLRQNGVDLPIMV
MNPAPETFSTLLEYKLEPEIYSLRLLREWEEFLRSREHAFANTQSTTYPIHLKIDTGMHR
LGFLERELTVVTDFLKRQPNLHVATVFSHLVGADDAQFNPFSRQQYETFLRCTEFLGAEL
GYMPTRHLLNSAGIVRFPDYKLDMVRLGIGLYGVEATGTEQSALQTVGTLRTIVSQIKTV
GAGESVGYSRRGVLDHDARIATLAIGYADGYDRRLGNGVGNVWVNGSYCPTVGSVCMDMT
MIDVTNASVSEGDEVLIFGPELPITELARRIGTIPYEILTGVSERVKRVFFKEGN
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgttaacaaaagaatttcaactgacgaaccgtcactggtttaccgattcaaggcaggta
acggggcatgcagcggattcgctggcaaacgaggctgttttcttcgccattctgggcgag
caccacgacggacacgcgttcatcggcgatctgtaccgcaaaggtattcgccagtttgtt
attgagcgatcagcgctaacccccgagcgacgggaggagctggcaacctatgccgatgct
cagtttaccaaggtcgacagcagtttacaaacgctgcaaacgctggctgctgaacaccgc
cggcagtttcgtattccggttatcggcattaccgggagtaatggaaagacgattgtaaaa
gaatggctggcgcagctcctcgccgatgagtatgtgattgcccggagtccgaaaagctac
aattcgcagttaggcgtaccgctgtctgtgcatcagctgaacgagagccataccatggcg
atttttgaggccggtatttcgcaaacccaggaaatgcaggctctggaagccataatccgg
cctaccattggcatctttacgaacataggcaccgcccacgatcaaggcttccgcacccga
aagcagaaagtggccgagaaactccggctctttattcatgccggtacgcttatttactgc
acggactacgcggacatcgacgaggaagtaaacctactgctgaaggccgttaatcccgac
atgcggttcattacctggtcgttaacgggtcaaaaagcgacttatcaggggcggattgcg
ggcaatcaggtcagtcttacgggcaagaacaccgggtttgatcagccattgaccctgcca
tttacagacccggcttcggtcgaaaacctcatgcactgcctggttacgatgctgtcgcta
cggacctggtcggctgctgaactgcaaagtcgcctgaatcgattgaggccagtgtcgatg
cggctggagcaaaaagaaggtatcaacaattgtgagttgatcgacgattcgtacaataac
gacatggttggcctgcaactcgcccttcggtttctgaatcagcagggcacccgcagccga
cgcatcgtcattttgtcggacgtgttgcaaacgggccagcccgaagctgagttttacgag
caggtggggaacctgatgcgggccaatgaagttgggcagttcattggtattggaccggtc
gtaagccgaaacaagctgtttttcgccgatggcagtcagttcttcgcaacaacggaggag
tttctggcgcagttttcgttcagcgagcttcgcgacagtaccgttctggtgaaaggagca
aggccattctcgttcgagcggattgtacaccggcttgagcgtaaagtacacggaacggtt
ctggaaatcaatctcgacgcgctgacgcataatctgaactactaccgcgagcgcatcagt
cggaatgatggcccgtctgaaacgaagattatggtgatggtcaaggcatttgcctacggc
agcggcagcgccgaagtggcgcaactgctacagtttcaccgggtcgattaccttgctgta
gcctatgccgacgaaggggtatcgctccggcagaatggcgtcgatttgccgataatggtc
atgaatcccgctcccgaaaccttttccaccctgctggaatataagctggaacccgaaatt
tacagcctgcggcttctgcgggaatgggaggagtttttaagaagccgggagcatgcattc
gcgaacacacagtcgacaacgtatcccatccacctcaaaatagataccggaatgcaccgg
cttgggtttctggagcgtgagctgacggtcgtgaccgactttctgaaacgccagccaaac
ctgcacgttgccaccgtattcagtcatctggtgggagccgacgatgcccagtttaatccg
ttttcccgacagcagtacgaaaccttcctgcggtgtaccgaatttttgggggcagagctg
ggctacatgcccacgcgtcatttgctaaactcagcgggtattgttcgtttccccgattat
aaactggacatggtgcggctgggcattggcttgtacggtgtcgaagcaaccggtaccgag
caatctgccctgcaaacagttggcaccctgcgtactattgtcagccaaattaaaactgta
ggggcaggcgagtcggttgggtatagccgccggggagtgctggaccatgacgcccgtatt
gcgacactggcaattggttatgcagatgggtacgaccgtcggctgggtaatggcgttggg
aatgtgtgggtcaatggaagctattgtccaaccgttggaagtgtctgcatggacatgacc
atgatcgatgtgacgaatgcatcggtcagcgaaggggacgaggtacttatttttggccct
gagcttcccattacggaactggcccggcgcattggaaccatcccgtacgaaattctgacc
ggcgtaagtgagcgggtcaagcgggtgttttttaaggaaggcaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (42)   

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