KEGG   Sulfuricaulis limicola: SCL_2705
Entry
SCL_2705          CDS       T05241                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
slim  Sulfuricaulis limicola
Pathway
slim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCL_2705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slim03019]
    SCL_2705
   03110 Chaperones and folding catalysts [BR:slim03110]
    SCL_2705
   03029 Mitochondrial biogenesis [BR:slim03029]
    SCL_2705
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slim04147]
    SCL_2705
Enzymes [BR:slim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SCL_2705
Messenger RNA biogenesis [BR:slim03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SCL_2705
Chaperones and folding catalysts [BR:slim03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SCL_2705
Mitochondrial biogenesis [BR:slim03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SCL_2705
Exosome [BR:slim04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SCL_2705
  Exosomal proteins of other body fluids (saliva and urine)
   SCL_2705
  Exosomal proteins of breast cancer cells
   SCL_2705
  Exosomal proteins of colorectal cancer cells
   SCL_2705
  Exosomal proteins of bladder cancer cells
   SCL_2705
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BAV34982
UniProt: A0A1B4XJK9
Position
complement(2748959..2750614)
AA seq 551 aa
MAAKDVLFGDPARTRMLRGVNILADAVKITLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDKYENMGAQMVKEVASKTSDVAGDGTTTATVLAQAMLREGLKSVAAGMNPMDLKRGI
DKAVAAAVEALKKISKPCSDPKEIAQVGTISANSDSSIGKIIADAMEKVGKEGVITVEEG
SGLDNELDTVEGMQFDRGYLSPYFINKQETMSAELENPSILIYDKKISNIREMLPILEGV
AKQGRPLLIVSEDVEGEALATLVVNNIRGILKVCAVKAPGFGDRRKAMLQDVAILTAGTV
ISEELGMSLEKADTSLLGSAKRVVVDKENTTIIDGAGKKQDIEARIKQIKAQIEEATSDY
DKEKLQERMAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGIVPGGGVALV
RAVTAIKGLKGDNHDQDVGIQIAVRAMQEPLRQIVENGGIEGSVVYHKVAESKDTNYGYN
AATDEYGDMLKMGILDPTKVTRTALQNAASVAALMITTEAMVAETPKEESHGGGGGMGGM
GGMGGMGGMDM
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgtattgtttggcgatcccgcccgcacgcgcatgctgcgcggcgtc
aacatcctggccgacgcggtgaaaatcacgctcggtcccaagggccgcaacgtggtgctg
gaaaaatccttcggcgccccgacggtgaccaaggacggcgtcagcgtcgccaaggaaatc
gaactgaaggacaaatacgagaacatgggcgcgcagatggtgaaggaagtcgcgagcaag
acttccgacgtggccggcgacggcaccaccacggcgaccgtgctggcccaggcgatgctg
cgtgagggcctgaagtcggtggccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtggccgcggcggtcgaggcgctgaagaagatctccaagccctgttccgat
ccgaaagagatcgcccaggtgggcaccatctccgccaactccgactcgtccatcggcaag
atcatcgccgatgccatggagaaggtcggcaaggaaggcgtgatcacggttgaagaaggc
tcaggtctcgataacgaactggacaccgtggaaggcatgcagttcgaccgcggctatctg
tcgccgtacttcatcaacaagcaggagacgatgagcgccgagctcgagaatccgtcgatc
ctgatctacgacaagaagatctccaacatccgcgaaatgctgccgatcctggaaggcgtg
gccaagcagggccgtccgctgttgatcgtttccgaggacgtcgagggcgaagcgctcgcg
accctggtggtgaacaacatccgcggcatcctcaaggtctgcgccgtcaaggccccgggc
tttggtgaccgccgcaaggccatgctgcaggatgtcgccatcctgacggcgggcacggtg
atctccgaggagctcggcatgagtctcgagaaggccgataccagcctgctcggttccgcc
aagcgcgtggtggtggacaaggaaaacaccacgattatcgatggcgccggcaagaagcag
gacatcgaggcccgcatcaagcagatcaaggcccagatcgaggaagccaccagcgactac
gacaaagagaagctgcaggaacgcatggccaagctggccggcggcgtcgccgtcatcaag
gtcggggccgcgaccgagatggaaatgaaagagaagaaggcgcgcgtggaagacgcgctg
catgcgacccgcgccgcggtggaagaaggtatcgtcccgggcggtggcgtggcgctggtg
cgcgccgtcacggcgatcaagggcctcaagggcgacaaccacgaccaggacgtcggcatc
cagatcgcggtgcgtgccatgcaggaaccgctgcgccagatcgtggagaacggcggtatc
gagggctcggtggtgtaccacaaggtcgccgagagcaaggacaccaactacggttataac
gccgcgaccgacgagtacggcgacatgctgaagatgggcatcctcgacccgaccaaggtg
acgcgtaccgcgctgcaaaacgcggcctccgtcgccgccctcatgatcacgaccgaagcc
atggttgccgaaacgccgaaggaagaatctcacggcggcggcggtggcatgggcgggatg
ggtggtatgggcggcatgggcgggatggatatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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