KEGG   Sulfuricaulis limicola: SCL_2745
Entry
SCL_2745          CDS       T05241                                 
Name
(GenBank) RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:3.6.4.13]
Organism
slim  Sulfuricaulis limicola
Pathway
slim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCL_2745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slim03019]
    SCL_2745
Enzymes [BR:slim01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     SCL_2745
Messenger RNA biogenesis [BR:slim03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SCL_2745
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: BAV35022
UniProt: A0A1B4XJP1
Position
complement(2788312..2789781)
AA seq 489 aa
MSDHHLSDKSFAGLNLPEPLLRGVHEAGFEYCTPIQAEALPLALAGQDVAGQAQTGTGKT
AAFLLAAFNHLLAHPAEGRLPTQPRAIMLAPTRELAVQIHRDAEVLGKHTGFRLGLVFGG
TGYDSQRKMLEEGVDVLIGTPGRLIDYFKQHVFDLNAVQVMVLDEADRMFDLGFIKDIRF
LLRRMPPPARRLSMLFSATLSYRVTELAYEHMNNPQFVSIEPDKRTADKVTQVLYHTALE
EKLPLLVHLLRQKDPTRSLVFTNTKDMAEHIAATLKANGLDAAVLSGDVPQNLRLRILLD
FTEGRLPVLVATDVAARGLHIPDVSHVFNYDLPQNAEDYVHRIGRTARAGASGDAVSFAC
ERFVFGLPEIEAYIGHKIPTAPVLPEMQPSIERVARPPRHDRGDRRPGGDRGRGGRPERG
RGQERGREREARRPERERPREPEVRRQEAAPRTEQPVETPAPPAKPVPSAKRLVRPALRR
PGGEKPVIG
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgagtgatcaccatctcagcgacaagtccttcgccggactgaacctgcccgagcccctg
ttgcgcggggtgcacgaggccggcttcgaatattgcacgccgatccaggccgaggcattg
ccgctggcgctggccggccaggacgtcgccggccaggcccagaccggcaccggcaagacc
gcggcgtttctgctggcggcgttcaaccatttattggcgcacccggccgagggccgcctc
ccgacccagccgcgtgccatcatgctggcgccgacgcgcgagctggcggtgcagattcac
cgggacgccgaggtgctgggcaagcacaccggcttccggctcggcctcgtgttcggcggt
accggctatgactcgcagcgcaagatgctggaagagggagtcgacgtgctgatcggcacg
cccggtcgtctcatcgattatttcaagcagcacgtgttcgatctcaacgcggtgcaggtc
atggtgctggacgaggccgaccgcatgttcgacctcggcttcatcaaggacatccgcttc
ctgttgcgacgcatgccgccgccggccaggcgcctcagcatgctgttctcggcgacgctc
tcgtaccgcgtcaccgaactcgcctacgagcatatgaacaacccgcagttcgtgagcatc
gagccggacaagcgcaccgccgacaaggtcacgcaggtgctgtatcacaccgccctcgag
gagaagctgccgctgctggtgcacctgctgcggcaaaaggacccgacccgcagcctggtg
ttcaccaacaccaaggacatggccgagcacatcgccgctacgctcaaggccaacggcctc
gacgccgcggtgctgtcgggcgacgtgccgcagaacctgcgcctgcgcatcctgctcgat
ttcaccgagggtcggctgccggtgctggtggcgaccgacgtggcggcgcgcgggctgcac
atcccggacgtgtcgcacgtgttcaattacgacctgccgcagaacgccgaggactacgtg
caccgcatcggccgtaccgcgcgcgccggcgccagcggcgacgccgtgagcttcgcctgc
gagcgctttgtgttcgggctgcccgagatcgaggcctacatcggccacaagatcccgacc
gcgccggtgctgccggagatgcagccgtccatcgagcgcgtggcgcggcccccgcgccac
gaccgtggcgatcgccgccccgggggcgatcgcggacgcggcggccgtcccgagcgcgga
cgcggccaggaacgtggccgcgagcgcgaggcgcggcggccggagcgtgaacgtccgcgc
gaaccggaggtccgacgtcaggaggccgcgccgcgtacggagcagcccgttgaaacaccg
gcgccaccggccaagccggtgccgagcgcgaagcggctggtgcggccggcactgcgccgc
cccggcggcgagaaaccggtcatcggttaa

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