KEGG   Shewanella livingstonensis: EGC82_02595
Entry
EGC82_02595       CDS       T05875                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
slj  Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:slj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:slj02048]
    EGC82_02595
Enzymes [BR:slj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     EGC82_02595
Prokaryotic defense system [BR:slj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   EGC82_02595
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N DEAD Ribosomal_L13
Other DBs
NCBI-ProteinID: AZG71750
UniProt: A0A3G8LS98
Position
558648..561917
AA seq 1089 aa
MIDTTQERIFQDDIIAQMVSKGWVEGSPDGYNRETATYEQDALAFVQATQPKEWQKLCKV
YPNEPESHFLKALVAQLTKADDNATDKESRLWGTLGVLRHGLNIRNARFSLCQFKPEHNL
NPETLARYQQNICRIVPELVYSPYATKEHLAATGKKAKAWRIDLVLFVNGIPVATLELKS
EFKQAVENAIKQYKRTRLAKDPVTKKREPLLSFKRGALVHFAVSQYEVYMATKLAGDDTF
FLPFNKGTKEGGAGNDVPEDSSLYATDYLWNEVLVPSNLLNIIGRFVHLQIEEKEDWEGR
KSKKETLIFPRYHQWDVVSKLINAAIDEGTGNKYLVQHSAGSGKSNSIAWTAHQLSTLYD
DKGEKQFHSVIVVTDRTVLDDQLQDTIYQFEHADGVVGRINNKEGDGSKSEKLALALETS
QPIIIVTIQTFPFVLRAIENSTSLKERSYAVIADEAHSSQSGSTARKLKEVLMTDEVDDD
VELSSEDILDATVAARQGSANLNYYAFTATPKAKTIELFGRLPNPELPPSKQNMPEAYHV
YSMRQAIEEGFILDVLKNYTNYKVMYQLAQKIEAADKEVDSKKATVKLNQWVRLHDHNIS
QKVKVIIEHFKDNVMGLLGGQAKAMVVTSSRKEAVRYKLAFDKYIAEALADKKTGYGAIR
AMVAFSGEVEFSENDPDSFAFLDQKFTEKNMNPDLKGRDMRKAFDSDDYQVMLVANKFQT
GFDQPKLCAMYVDKKLGGVECVQTLSRLNRIYPSKTETGTFVLDFYNSPDDILESFQPYY
QTAELTDVTDPNMVFDLFEKLRTSGIFLWAEVEKFCEAFFTKKKSNAAISNICYPAKDRW
QKRYASAIDAYIKAKEMFERTKLTGDAVLIANAENSFKDCKQEKDRLEIFKKDLGSFTRF
YEFMSQLVDYDDKELEKLSLYARHLRPLLREKVVEEDELDLDNVVMSHYRLSKIRQQDIQ
LKEDAVEYGLEPSSDVGSAKAKDKKEELLSYVLEKLNEAFANENLSDGDLINTVRKWSEK
VRENETVMAQIKNNSRAQAMLGDFPVASDEAVMASSSAEQEMMVKYLSDPSTRQNVLEVM
FDMLNGHRA
NT seq 3270 nt   +upstreamnt  +downstreamnt
gtgatagatacaacccaagagcgtatttttcaagacgacatcattgctcaaatggtaagt
aaaggttgggttgaaggctcgccagacggttacaaccgtgagactgcaacctatgagcaa
gatgcgttggcgttcgtacaggccactcaacccaaagagtggcaaaagctgtgtaaggtg
tatcccaatgagccagaaagtcatttcttaaaagcactagttgcccagttaaccaaagcc
gatgataacgcgactgacaaagagtctcgtctttggggaaccttgggtgtgcttcgtcat
gggttaaacattcgtaatgcccgcttctcgttatgccagttcaagcccgagcataacctt
aaccctgaaactctggcgcgttaccaacaaaacatttgccgtattgtgcctgagttggtg
tatagcccctatgccactaaagagcatttagctgctacgggtaaaaaagccaaagcatgg
cggattgacctagtgttgttcgttaatggtatacctgttgcgacattagagctcaagtct
gagtttaagcaagctgtcgagaatgcgataaaacaatataaacgtactcgcttagctaaa
gaccctgtgaccaagaagcgtgagccattattgagttttaaacgtggcgcattggtgcat
tttgctgtgagtcagtatgaagtctacatggcaactaagctagcgggtgatgacaccttc
tttttgccgtttaacaaaggcaccaaagaaggcggtgcgggtaacgatgtacccgaagat
agcagcctttatgctactgattatttgtggaacgaggtgttagtaccaagcaacctatta
aacatcattggccgctttgtgcatttacaaattgaagagaaagaagactgggaaggccgt
aagtctaaaaaagaaacccttatcttcccgcgttatcatcaatgggatgtcgtttctaag
ctaatcaatgccgcgattgacgaaggtacgggtaataaatacctagtgcagcatagtgct
ggctcgggtaagtcgaactctattgcatggacagcccaccagctatccacgttatacgat
gataaaggtgaaaagcaattccattcggtgatagtggtgaccgatcgcaccgtgcttgat
gatcagctgcaagataccatttaccagtttgaacatgctgatggcgtagtcgggcggatt
aataacaaagagggcgatggctctaaatctgaaaagctggcattggcgctggaaacttca
cagccaattatcattgtgactattcagactttcccgtttgtattacgtgcgatagaaaat
tcgacctcgctgaaagagcgtagctatgcggtgattgccgatgaggcgcattcatcacaa
agcggctcaacagcacgtaagctgaaagaagtattgatgaccgatgaggttgatgatgac
gttgagttatcgtcagaggacattttagacgccactgttgccgcacgacaaggcagtgcc
aatcttaattactatgcctttactgctacacctaaagcgaaaaccattgagttgtttggg
cgtttacctaatccagagcttccaccatcaaagcagaatatgccagaggcgtatcatgtg
tattcaatgcgccaagccattgaagaaggctttattctggatgtgctaaaaaattacacc
aactacaaagtgatgtaccaattagcgcagaagatagaggctgccgataaagaagtcgac
agtaagaaggccacggtaaaactcaaccaatgggtgcgtttgcatgatcacaacatttca
caaaaggtgaaagtgattattgagcactttaaagataacgtaatgggcttattgggcggt
caggcgaaagctatggttgttaccagctcacgtaaggaagcggtgcgctacaagcttgcc
tttgacaagtacattgcagaagcgcttgctgataagaaaactggctatggtgcaatacga
gccatggtggcattttctggtgaagttgagtttagcgagaatgatcctgatagcttcgca
tttttggatcagaagtttaccgagaaaaacatgaatccagaccttaaaggtcgggatatg
cgcaaagctttcgacagtgatgattatcaagtaatgctggtggccaacaagtttcaaaca
ggctttgatcaacctaagttatgtgccatgtatgtagataagaaacttggcggtgttgaa
tgcgtgcagaccctttcgcgtcttaatcggatctaccctagtaagaccgagacaggcacg
tttgttttagacttttataattcgcctgatgacattctagaatcgtttcagccttattat
cagactgctgagctcaccgatgttaccgatcctaacatggtgtttgatttgtttgagaag
ctacgcacaagcggcattttcttatgggcagaggtggagaagttttgtgaggctttcttt
actaagaaaaagtctaatgctgccattagtaatatttgctatccagctaaagaccgttgg
cagaagcgctatgcatctgcgattgatgcttacatcaaagccaaagaaatgtttgaacgt
acgaagctaacaggcgatgcagtgctgatagccaatgctgaaaatagctttaaggattgt
aagcaagaaaaagaccgtcttgaaattttcaagaaagacttgggtagctttactcgtttt
tatgagtttatgtctcagctggtggattatgacgacaaagagctagaaaaactgagcttg
tatgcacggcaccttcgtcctctattacgtgaaaaagtcgtagaagaagatgagctggat
ttggataacgtggtaatgagtcactatcgtttatctaaaattcgtcagcaagatattcaa
cttaaagaagatgccgttgagtatgggcttgaacctagttcggatgtcggctcagccaaa
gcgaaagataaaaaagaagagctgttgtcgtatgtgcttgaaaaattgaatgaagcattt
gccaatgaaaacttatcagatggtgatttgattaataccgtccgtaagtggagtgaaaag
gttcgtgagaacgagactgttatggcgcaaatcaagaacaactctagagctcaagccatg
ctcggtgacttccctgtggcgagtgatgaagcggtgatggctagctcaagcgctgaacag
gaaatgatggtgaaatatttgagtgatccttctactcgtcaaaatgtattagaggtcatg
tttgatatgttgaatggtcatagggcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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