KEGG   Streptomyces lunaelactis: SLUN_28880
Entry
SLUN_28880        CDS       T06347                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
slk  Streptomyces lunaelactis
Brite
KEGG Orthology (KO) [BR:slk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slk03016]
    SLUN_28880
Enzymes [BR:slk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     SLUN_28880
Transfer RNA biogenesis [BR:slk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SLUN_28880
 Prokaryotic type
    SLUN_28880
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: AVZ75624
UniProt: A0A2R4T959
Position
6245017..6245916
AA seq 299 aa
MTEQNRTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKAT
KLLGHLALTEKEYLGTIRLGQNTVTDDAEGEITSSADASGVTREGIDAGVAKLTGAIMQV
PSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSSFQVYDVREAVAEDGTPVVDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYGLDAAKTLDQLQEELTVMPIADAAA
AAFPRWDVDERQAKLLTNGVRLDMPAYESAPVAVFGPDGRFVALVEEQKGKAKSLAVFG
NT seq 900 nt   +upstreamnt  +downstreamnt
atgacggagcagaacaggacgccggacggccttgtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtcgtcgccaagatgcgcgggatcgccaggacccgccgcgtcggacac
gcggggacgctggaccccatggccaccggtgtgctggtcctgggcgtcgagaaggccacc
aaacttctcgggcacctcgcgctgaccgagaaggagtacctcggcaccatcaggctgggg
cagaacaccgtcaccgacgacgcggagggcgagatcacgtcctcggccgatgcctccggg
gtcacccgggagggcatcgacgcgggcgtcgccaagctgaccggcgccatcatgcaggtg
ccgtcgaaggtcagcgccatcaagatcgacggcaagcggtcgtacgcgcgcgtgcgtggc
ggcgaggaattcgagatcccggcccggccggtgaccgtgtcgtcgttccaggtgtacgac
gtgcgggaggcggtggccgaggacgggacgccggtcgtggacctggtcgtctcggtggtc
tgctcgtccggtacgtacatccgcgctctcgcccgtgacctcggcgccgatctgggcgtc
ggcgggcatctgacggcgctgcggcggacccgggtcggtccctacggactcgacgcggcg
aagacgctcgaccagctccaggaggagctgaccgtgatgccgatcgccgatgccgcggcg
gccgcgttcccgcgctgggacgtggacgagaggcaggcgaagctgctcaccaatggcgta
cggctggacatgccggcctacgagtccgcgccggtggcggtcttcggacccgacgggcgc
ttcgtggcactggtggaggagcagaagggcaaggccaagagcctcgccgtcttcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system