KEGG   Stenotrophomonas sp. LM091: BIZ42_03875
Entry
BIZ42_03875       CDS       T04630                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
slm  Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:slm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slm03016]
    BIZ42_03875
Enzymes [BR:slm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     BIZ42_03875
Transfer RNA biogenesis [BR:slm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BIZ42_03875
 Prokaryotic type
    BIZ42_03875
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AOX61402
UniProt: A0A1D8Y761
Position
complement(859888..860661)
AA seq 257 aa
MRYALGVEYDGSEFKGWQQLGESGCPSVQASLQEALSSVANAPIQVVCAGRTDAGVHGEC
QVVHFDTDVVRDPRSWMLGTTTRLPRSIAVRWCVPVADEFHARFAARARRYRYRLLNRQV
RPALYRQTLSWERRPLDAGLMHAAGQALLGENDFSAFRSVQCEALHARRNMQSLSVTRQG
EVVEVAVQANAFLHHMVRNIVGSLILVGCGEQPVSWMEQLLAGRDRTVAGPTAPPQGLVF
VGPLYPDNWQLPAEVTL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgcgctacgcactgggcgtggaatacgacggcagcgaattcaaaggctggcagcagctc
ggtgagagcggctgcccgagcgtgcaggccagcctgcaggaagcgctgtcctcggtggcc
aatgcgccgatccaggtcgtgtgtgccgggcgtaccgatgccggcgtccacggcgaatgc
caggtcgtgcatttcgataccgatgtcgtgcgcgatccgcgcagctggatgctgggcacc
accacccgcctgccgcgctcgatcgccgtgcgctggtgcgttccggtggccgatgagttc
catgcgcgcttcgccgcgcgcgcgcgacgctaccgctatcgcctgctcaatcgccaggtc
cgcccggcgctgtatcggcagaccttgagctgggagcgccggccgctggatgccgggctg
atgcatgcggcagggcaggccctgctgggcgagaacgacttcagtgccttccgcagcgtg
cagtgcgaggccctgcacgcgcgccggaacatgcagtcgctctcggtgacccgccagggc
gaggtggtggaggtcgccgttcaggccaatgcattccttcatcacatggtgcgcaatatc
gtcggttcactgattctggtcggttgtggtgagcaaccggtctcgtggatggagcagttg
ctggccgggcgcgaccgtaccgtcgccggcccgaccgctccgccgcagggattggtcttc
gttggtcccctgtaccccgacaactggcagctgcctgccgaggtcaccttatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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